Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g00610 ATGTCTGCACACAAGACATATGGTCGGCTTAGCTCAGCTGACAATGCCAATATTACTAGGCTGGATGCCTTTAACCGTTCCAATCCGGAACCTCACGGTGTGGCTGATGTCAAGGACAGTGTTGATGAAGAGAATATCGATGAAGCTGAATATTATGCATGGAACGAGTTGAGGCTTCATCCTCGTTTAATGAAAGCAATACACAAGTTGGGATTCAAGGAACCAACACCGATACAGAAAGCATGTATTCCGGCTGCTGCTCATCAAGGGAAGGATGTTATTGGGGCTGCAGAGACGGGATCTGGTAAAACACTTGCGTTTGGTTTGCCCATTTTGCAACGTCTTTTGGAGCGGGAGAAGGCTGAAAGTATAAGTGGGTTACATTCATTGTCTTTCTTTGTGCTTGACGAGGCTGATCGAATGGTACAAAGTGGTCATTTTAAGGAGTTACAATCAATAATTGACATGCTTCCCATGTCCAATGTCTCCGGTGAAGATAATTCTAAAGATGCACAGAATTGTGTTACAGTTTCTAGCATCCAAAGAAAGAAAAGGAAAACTCTTGTTTTTTCAGCGACTGTTGCACTGTCCGCTGATTTTCGCAAGAAGTTAAAGCGTGGTTCAATTCAGAAAAAGCAACCATCGACAGATGGTTTGGATTCTATTGAAACTCTTTCTGAGAGAGCAGGAATGAGACCCAATGCTGCAATTATTGATCTTACCAATCCATCAATATTAGCAGGCTAA 747 0.4244 MSAHKTYGRLSSADNANITRLDAFNRSNPEPHGVADVKDSVDEENIDEAEYYAWNELRLHPRLMKAIHKLGFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPILQRLLEREKAESISGLHSLSFFVLDEADRMVQSGHFKELQSIIDMLPMSNVSGEDNSKDAQNCVTVSSIQRKKRKTLVFSATVALSADFRKKLKRGSIQKKQPSTDGLDSIETLSERAGMRPNAAIIDLTNPSILAG 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g00610 248 Gene3D - 125 208 IPR027417 -
Mepo7g00610 248 SMART ultradead3 71 222 IPR014001 -
Mepo7g00610 248 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 52 80 IPR014014 GO:0003724
Mepo7g00610 248 PANTHER RNA HELICASE 41 116 - -
Mepo7g00610 248 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 134 142 IPR000629 -
Mepo7g00610 248 Gene3D - 23 124 IPR027417 -
Mepo7g00610 248 Pfam DEAD/DEAH box helicase 127 195 IPR011545 GO:0003676|GO:0005524
Mepo7g00610 248 Pfam DEAD/DEAH box helicase 76 118 IPR011545 GO:0003676|GO:0005524
Mepo7g00610 248 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 84 212 IPR014001 -
Mepo7g00610 248 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 47 195 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g00610 Mepo-Chr7 10146814 10149316 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g00610 53 115 Eukaryotic Initiation Factors Gene Family AT5G11200 41.270 3.33e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g00610 K14805 - gmx:100806018 201.83