Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g00599 ATGCCTGTTATCACAGGACACATGAAGTGGAGAAGACCCAGAAACAAATTAAGGCACCCCATTTCAGAAACTGATCAAACTTCACAACTTTCTTCCTTAATCCAATCCACTTCTTGCAAATCAAGTATCTCCACTCTCTTTTCCACTTTCACCAATAACACATCCAATGAAACCACACATGACAGTAACCAAAATAGGACAAAGAAGAACAACAAAAACAGTAACACTAATAACAACTTTTCTTCATCAACCTTCAGAGGACTCGGTTGCACTGCCGGTACATCACAACAGGTGTCTGTACCGGCAGTGATCCGATCCTCTGCAGATTGGCAAGGGAAGAAGAACAGGAAAAAGAAGAACAGAAGGAACAAAACATGTCATGGTGTTGATGATGTGGATTTTCAGGATGTTTGGTGTGGACCTGGAACTGGATTCTTATCTGATGCTGCTGCTGATGTTTCTGTGGATTGTGTTGTTGCAAGAAAGAATGTTTCTTCAAGAGGAAAACTTGATAATGGTGAAAGGATAACACATAGAGAGCGTTCATCAATTTTTGGAAGGCGTAGTGTAAACCTAAATCAAGAAAGTTTGTCATTTTTGGAAGATAATTCTGATATTTTCACAACACGACGTGGATTAGAGTCTTTTGGAAATAGTGGATTTTATCGTAATGCTTCGAATGTTTCTTCTGATGGTATTGCTGAGATAATGAAATTTAAAGGAGCTAGACTAATGGGGGGACGATCACGTGATCAATTTAGAGACTGGAGACTTGATGTTGATAATATGTCATATGAGCAATTGCTTGAGCTGGGAGAGAGAATTGGTTATGTGAAAACTGGACTTAAAGAAGACGAGATGAAAAACAACATAAGGAAAATTAAGCTTTTGATTTCAAATGATTCATCAAAGCATCAAATAGACAAAAAGTGCACCATTTGTCAAGAGGAGTATGAATCAGATGATGAATTGGGTAGATTACATTGTGAACACAGCTATCACTTTCAGTGTATAAAACAATGGCTTGTGCTTAAAAACTTCTGCCCGGTCTGTAAGCAAGAAGTCGTGGTTCGACCTTGA 1080 0.3843 MPVITGHMKWRRPRNKLRHPISETDQTSQLSSLIQSTSCKSSISTLFSTFTNNTSNETTHDSNQNRTKKNNKNSNTNNNFSSSTFRGLGCTAGTSQQVSVPAVIRSSADWQGKKNRKKKNRRNKTCHGVDDVDFQDVWCGPGTGFLSDAAADVSVDCVVARKNVSSRGKLDNGERITHRERSSIFGRRSVNLNQESLSFLEDNSDIFTTRRGLESFGNSGFYRNASNVSSDGIAEIMKFKGARLMGGRSRDQFRDWRLDVDNMSYEQLLELGERIGYVKTGLKEDEMKNNIRKIKLLISNDSSKHQIDKKCTICQEEYESDDELGRLHCEHSYHFQCIKQWLVLKNFCPVCKQEVVVRP 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g00599 359 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 39 355 IPR045191 GO:0061630
Mepo7g00599 359 MobiDBLite consensus disorder prediction 105 126 - -
Mepo7g00599 359 ProSiteProfiles Zinc finger RING-type profile. 311 352 IPR001841 -
Mepo7g00599 359 MobiDBLite consensus disorder prediction 1 29 - -
Mepo7g00599 359 FunFam E3 ubiquitin-protein ligase rnf12-A 278 357 - -
Mepo7g00599 359 Pfam Ring finger domain 310 352 IPR001841 -
Mepo7g00599 359 MobiDBLite consensus disorder prediction 50 82 - -
Mepo7g00599 359 SUPERFAMILY RING/U-box 310 357 - -
Mepo7g00599 359 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 277 357 IPR013083 -
Mepo7g00599 359 SMART ring_2 311 351 IPR001841 -
Mepo7g00599 359 MobiDBLite consensus disorder prediction 68 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g00599 Mepo-Chr7 9963777 9968361 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g00599 4 266 C3H Transcription Factor Family AT1G73760 37.500 5.23e-38 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g00599 - - gmx:100818517 432.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo7g00599 7 9963777 9968361 Mepo2g05050 2 58444244 58447579 ECH
Mepo7g00599 7 9963777 9968361 Mepo7g00599 7 9963777 9968361 ECH