LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo7g00551	ATGGCTACTAAAAGGTTTTCTGATGATTCTAATGATAAAGATGAAGACAATCGAAACGACAAACGAATGAGACCTTCTTTAGCTTCTGTACTAGAAAGAGCAGTTAAAGTGCAAAACATGCAGAACCTTTTAGGAGCTTTGGAACCTTTTCTTAAAAGAGTTGTGAGTGAAGAGGTGAATAGATCAATTGGAAACTGCTTTCCATCTTCCATCAATAGGTCACCTTCATTAAGAATCCAAGCACCAAGGGATCAACAACCAACCTTACAACTCTTATTCAACAAAAGGCTTTCCCTCCCAATTTTCACAGGTAGTAGAATACTCGACATTGAAGGTAAACCTATCAGCATAAGTCTTGTTGACAAAACCAACAATAGCCAAATTGTTCCAACAAGTCTTCCTTACCCTATAAAGCTAGAGATAGTTGTACTTGATGGAGATTTTCCTCTTGATGAAAACGAAAGTTGGACTAGTGAAGAATTCAATAAATACATAGTGAAGGAAAGAACTGGGAAGAGACCATTACTTTCTGGAGAATTGAACTTTACTATGAGAGGTGGAATTGCACCAATTGGAGACATAGAGTTCACAGATAATTCTAGCTGGATAAAGTGCAGGAAGTTTAGAGTTGCAGTTAAGGTGAGTCATGGGAGTAATCAAAGTGTTAGGATTCAAGAAGGCATGACTGAGGCATTTGTTGTGAAAGATCATCGTGGAGAATTGTACAAAAAACACCATCCACCAATGCTTGGCGATGATGTGTGGCGCCTAGAGAAGATAGGGAAAGATGGAGCTTTCCACCAAAAAATGATGGCTAAGGGGATCAAAACAGTGCAAGATTTTCTTAAATTAGCAGTTATTGATACTCAAAAGCTAAGAGAGATTTTGGGCATTGGGATGTCTGATAAAATGTGGAAAGTCACAATAAAGCATGCAATGACTTGTGACATGGGGAGCAAGATCTATAAGTACCATGGACCTCAGTTTTTCATTCTTCTGAATCCAATATGCAAATTTATTAAAGCTAATATCAATGGACAAGAATTTTCCAGCAGAGAGTACTTGAGCCAAATGAATAAGAGCTATATAGACAAATTGGTTGGAGAAGCATACACAAAATGGGATGAGTTGGAGGAAATTGATGGAGTTTTAAATGATAACATTGCTTTGTTAACTCAAGGTGATCAAACTGTGGAGCAACATCTAAACAATCATCCAGCAACAGTTGCAACAACATATCATCAAAATCAATATTATGGTGATCCATCTATAGAAAATATTGCTAGCCATGTACCAAGCAATAATGCACAAATTGCTAGCAGTGAGTGGTTATTGAATCAAGCCTATACCACAACACCAAATGCAAATGGATTTCCTTTTGGCTTCATAGGCTCACAATCAGATGGGGACATGACACCTTCAGGTTCAGGCCCTAGGGACATTAATGGGTTCACAAGGCAACTTTAG	1467	0.3797	MATKRFSDDSNDKDEDNRNDKRMRPSLASVLERAVKVQNMQNLLGALEPFLKRVVSEEVNRSIGNCFPSSINRSPSLRIQAPRDQQPTLQLLFNKRLSLPIFTGSRILDIEGKPISISLVDKTNNSQIVPTSLPYPIKLEIVVLDGDFPLDENESWTSEEFNKYIVKERTGKRPLLSGELNFTMRGGIAPIGDIEFTDNSSWIKCRKFRVAVKVSHGSNQSVRIQEGMTEAFVVKDHRGELYKKHHPPMLGDDVWRLEKIGKDGAFHQKMMAKGIKTVQDFLKLAVIDTQKLREILGIGMSDKMWKVTIKHAMTCDMGSKIYKYHGPQFFILLNPICKFIKANINGQEFSSREYLSQMNKSYIDKLVGEAYTKWDELEEIDGVLNDNIALLTQGDQTVEQHLNNHPATVATTYHQNQYYGDPSIENIASHVPSNNAQIASSEWLLNQAYTTTPNANGFPFGFIGSQSDGDMTPSGSGPRDINGFTRQL	488

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo7g00551	488	PANTHER	OS02G0177800 PROTEIN	4	454	IPR012416	GO:0005516
	Mepo7g00551	488	MobiDBLite	consensus disorder prediction	467	488	-	-
	Mepo7g00551	488	Pfam	Calmodulin binding protein central domain	249	315	IPR046830	-
	Mepo7g00551	488	Pfam	Calmodulin binding protein C-terminal domain	320	380	IPR046829	-
	Mepo7g00551	488	Pfam	Calmodulin binding protein-like N-terminal domain	89	237	IPR046831	-
	Mepo7g00551	488	MobiDBLite	consensus disorder prediction	1	25	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo7g00551	Mepo-Chr7	9282442	9287789	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo7g00551	9	382	Calmodulin-binding Proteins	AT5G57580	46.842	1.80e-113	347

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo7g00551	-		-	gmx:100792405	629.787