Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g00547 ATGGCGACGCCGTTAATCCCGCAACAGCAGCACTTAGACGGCGGAGGAGGAGTGGCGGTTCTGACGAATCTTGTTCCTCCTTCTTCTTCCAATGGTGGTGGTGGATTCAACCGTTCCTCTTTAACAGAATCGCCAATTTTGATTTTCTCGTTCTTTCAAAAAGCGATTGGGAACGAGCTCGATGCGTTGCATCGATTAGCTTTGGATTTTGCTACTGGAAATTGTTTCGATATTGTTCCGTTATCGGAACGGTATCATTTTCTTAGATCGATGTATAGACACCATTCCAATGCTGAAGATGAGGTGATTTTTCCAGCCCTAGATAGGCGTGTGAAGAACGTAGCACAGACATATTCTCTTGAACACAAGGGGGAAAGCAACCTCTTTGACCATTTATTTGAGCTTTTAAACTCTTCCGGTGACAATGATGAAAGTTTCCGAAGGGAGTTGGCATCCTGCACAGGAGCTCTGCAGACATCTGTTAGCCAACACATGGCTAAGGAGCAGCAGCAAGTTTTTCCGCTGCTTATTGAGAAGTTCTCCGTGGAGGAGCAAGCATCTTTAGTTTGGCAGTTTCTTTGCAGTATTCCAGTGAATATGATGGCAGAATTTCTGCCATGGCTTTCAACATCGATATCACCTGATGAATCTCAGGATTTACGGAAGTGCTTAAGCAAGATTGTGCCAGAGGAAAAGCTTCTTCAAAAGGTTATTTTCACCTGGATGGAAGGGCGAAGTAGTGCTAAGACAGTTGAAAATTGTGTAGATCATTCTCAGGTTCAATGTAGTCCTAGTCCTTTAGCCAATCAGAATGGGAAAGTAACATGTGCATGTGAGTCCACTGTATGTGGGAAAAGAAAATATTCTGCATCTCTTCTAGAAGTTCCAGATACAATGGGTTCACATCCGATAGATGAAATATTGCTCTGGCATAATGCTATAAAAAAAGAGTTAAATGAGATAGCAGCAGAGACCAGAAAGATACAACACTCTGGAGATTATACTAATCTGTCTGCTTTTAATGAAAGGTTGCAATTCATCGCCGAAGTTTTCATATTTCACAGTATTGCTGAGGACAAGGTTATTTTTCCGGCAGTAGATGGGGATTTTTCTTTCTTTCAGGAGCATGCTGAAGAAGAAAGCCAATTTAATGACTTCCGATCTTTGATTGAAAGAATTGTAAGTGAAGAAGCAACATCTAGTTCGGAAGTTGAACTTTATTCCATGTTGTGCTCACAAGCTGATCATATAATGGAAACCATACAGAAGCATTTCCATAATGAAGAAGTTCAGGTTCTTCCACTTGCACGGAAGCACTTTAGCCTCCAAAGGCAACGTGAACTAGTATATGAAAGCTTGTGTATGATGCCTTTGAAATTGATTGAGCGTGTCCTACCATGGTTTGTTGGATCACTAACCGAAGATGAAGCAGAGATATTTCTGAAAAACATACAATCGGCAGCTCCAGCAATGGATTCTGCTTTAGTCACACTCTTCTCTGGTTGGGCTTGCAAGGCTCGTAAAAATGGTCGGTGCTTGTCTTCAAATGCATCACGTTTCTGTCCTGCTAAAAAAATAGTCCGGTCTTCGTGTGCTTGTGCTTCTGCATTGTCTGGTAAAGATTGCTCAGTATTAGCTGAATCAGATGGGACCCAGAGATCAGTCAAGCGAAGCATATTAGAGTTGCAAAAAAATGGAGATGTCTCAAAAACACCAGAAAATGAATCGGCCCTGAAACCATGTTGTGGTGCCCGGTCTTGTTGTGTGCCAGCGTTAGGGGTCAACAGTAACAATTTGGGGCTGAGTTCACTTTCTGCAGCCAAGTCCTTACGAAACTTCACTTCTTCCGCCCCATCTATTAATTCTAGTCTTTTCATATGGGAAACAGACAGCAGCTCATGTGATGTTGGCTCTGCAGAAAGACCAATTGATACCATATTTAAATTCCATAAAGCTATACGCATAGATTTGGAGTATTTAGATGTTGAATCTGGAAAGCTTTGTGATGGCGATGAAGCAACTATTCGGCAATTTACTGGAAGATTTCGTCTTTTGTGGGGTTTATACAGAGCTCATAGTAATGCTGAAGACGATATAGTTTTTCCTGCATTGGAATCCAAAGAGACACTTCATAATGTGAGCCATTCATACACGCTGGATCATAAGGCGGAAGAAAAGTTATTTGAAGATATTTCTTGTGTTCTTTCTGAGCTTTCTGTCCTTCATGAAGCATTGCAGAGTACCCATTTGTCAGAGGATTTAAGTGAACGTAATTTGGGAATATCTGAGGCCAATGATAGTGATGATATCAGAAAGTATAATGAGCTTGCAACTAAGCTACAAGGGATGTGTAAATCTATACGAGTGACCCTGGATCAGCATATTTTCAGGGAAGAGCTTGAACTCTGGCCATTGTTTGGGAAACATTTCACTGTGGAAGAACAAGACAAGATAGTGGGCCGGATAATTGGAACTACAGGGGCCGAAGTTCTCCAGTCAATGTTACCGTGGGTAACTTCTGCACTTACACAAGATGAACAGAACCAAATGATGGACACATGGAAACAAGCAACTAAGAATACAATGTTCAACGAATGGCTAAATGAAAGCTTGATAGAGAGTCCAGGATCTACATCACAGACAGAAACATCAGAACATGGCACTTCTCAAAGAGGTGCTGAATATCAAGAAAGCTTGAACCTGAATGATCAGATGTTTAAGCCGGGTTGGAAAGACATATTCCGGATGAATGAAAATGAAATTGTGTCTGAAATCCGGAAGGTTTATCGTGACTCAACCCTTGATCCAAGAAGAAAGGCATACCTTGTGCAGAATCTCATGACAAGTCGCTGGATAGCTGCCCAACAGAAGTTACCTAACTCTCAATCTGGGGAATCATCTAATAAACAAATAGAAGGGTGCGCACCTTCATTTCGGGACCCAGAGAAAAAAGTATTTGGTTGTGAGCACTATAAGAGAAATTGCAAAGTTCGAGCTGCTTGTTGTGAGAAGTTATTTACATGCAGATTTTGTCATGACAACAATTCAACTGATCACTCAATGGATAGAAAAGCAACAACGGAAATGATGTGTATGGCCTGCCTGACTATACAGCCAGTTGGACCCATATGCATGACGCCTTCATGTAATGGACTTTCAATGGCAAAGTACTACTGTAACATTTGTAAATTTTTTGATGATGAAAGGAATGTTTACCATTGCCCATTCTGCAATATATGCCGTGTTGGACAAGGGCTTGGCATTGATTACTTTCATTGTATGAAATGCAATTGTTGTGTGGGGATCAAATCAGTGTCTCACAAGTGCCGGGAGAAAGGGTTAGAAATGAACTGCCCAATTTGTTGTGACGACTTGTTCACGTCAAGTGCAACTGTCAGAGCTCTAGTTTGCGGGCATTACATGCATTCATCTTGCTTTCAGGCCTACGCTTGCAGTCACTACACATGCCCAATCTGCAGCAAGTCATTGGGAGATATGGCGGTTTACTTTGGTATGCTTGATGCATTGCTGGCTGCTGAGCAGCTTCCTGAAGAGTACAAGGACCGCACTCAGGACATACTCTGTCATGACTGCGATCGAAAGGGAACTTCACAATTCCACTGGTTATATCATAAATGTGGATTTTGTGGCTCATACAATACCCGGGTGATCAAAAGTGAGACAACAAATTCCAGCTGCCCTTGA 3705 0.4186 MATPLIPQQQHLDGGGGVAVLTNLVPPSSSNGGGGFNRSSLTESPILIFSFFQKAIGNELDALHRLALDFATGNCFDIVPLSERYHFLRSMYRHHSNAEDEVIFPALDRRVKNVAQTYSLEHKGESNLFDHLFELLNSSGDNDESFRRELASCTGALQTSVSQHMAKEQQQVFPLLIEKFSVEEQASLVWQFLCSIPVNMMAEFLPWLSTSISPDESQDLRKCLSKIVPEEKLLQKVIFTWMEGRSSAKTVENCVDHSQVQCSPSPLANQNGKVTCACESTVCGKRKYSASLLEVPDTMGSHPIDEILLWHNAIKKELNEIAAETRKIQHSGDYTNLSAFNERLQFIAEVFIFHSIAEDKVIFPAVDGDFSFFQEHAEEESQFNDFRSLIERIVSEEATSSSEVELYSMLCSQADHIMETIQKHFHNEEVQVLPLARKHFSLQRQRELVYESLCMMPLKLIERVLPWFVGSLTEDEAEIFLKNIQSAAPAMDSALVTLFSGWACKARKNGRCLSSNASRFCPAKKIVRSSCACASALSGKDCSVLAESDGTQRSVKRSILELQKNGDVSKTPENESALKPCCGARSCCVPALGVNSNNLGLSSLSAAKSLRNFTSSAPSINSSLFIWETDSSSCDVGSAERPIDTIFKFHKAIRIDLEYLDVESGKLCDGDEATIRQFTGRFRLLWGLYRAHSNAEDDIVFPALESKETLHNVSHSYTLDHKAEEKLFEDISCVLSELSVLHEALQSTHLSEDLSERNLGISEANDSDDIRKYNELATKLQGMCKSIRVTLDQHIFREELELWPLFGKHFTVEEQDKIVGRIIGTTGAEVLQSMLPWVTSALTQDEQNQMMDTWKQATKNTMFNEWLNESLIESPGSTSQTETSEHGTSQRGAEYQESLNLNDQMFKPGWKDIFRMNENEIVSEIRKVYRDSTLDPRRKAYLVQNLMTSRWIAAQQKLPNSQSGESSNKQIEGCAPSFRDPEKKVFGCEHYKRNCKVRAACCEKLFTCRFCHDNNSTDHSMDRKATTEMMCMACLTIQPVGPICMTPSCNGLSMAKYYCNICKFFDDERNVYHCPFCNICRVGQGLGIDYFHCMKCNCCVGIKSVSHKCREKGLEMNCPICCDDLFTSSATVRALVCGHYMHSSCFQAYACSHYTCPICSKSLGDMAVYFGMLDALLAAEQLPEEYKDRTQDILCHDCDRKGTSQFHWLYHKCGFCGSYNTRVIKSETTNSSCP 1234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g00547 1234 MobiDBLite consensus disorder prediction 874 893 - -
Mepo7g00547 1234 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1114 1162 IPR013083 -
Mepo7g00547 1234 SUPERFAMILY Zinc hairpin stack 1055 1110 IPR037275 -
Mepo7g00547 1234 CDD Hr-like 305 434 - -
Mepo7g00547 1234 SMART ring_2 1118 1159 IPR001841 -
Mepo7g00547 1234 SUPERFAMILY RING/U-box 1116 1163 - -
Mepo7g00547 1234 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 685 1230 - -
Mepo7g00547 1234 Pfam Ring finger domain 1117 1159 IPR001841 -
Mepo7g00547 1234 Gene3D - 1188 1231 - -
Mepo7g00547 1234 ProSiteProfiles Zinc finger RING-type profile. 1118 1160 IPR001841 -
Mepo7g00547 1234 CDD RING-H2_Pirh2-like 1117 1160 - -
Mepo7g00547 1234 Pfam CHY zinc finger 988 1064 IPR008913 GO:0008270
Mepo7g00547 1234 Pfam Zinc-ribbon 1165 1222 IPR039512 -
Mepo7g00547 1234 ProSiteProfiles Zinc finger CTCHY-type profile. 1054 1117 IPR017921 -
Mepo7g00547 1234 SUPERFAMILY CHY zinc finger-like 981 1045 IPR037274 GO:0008270
Mepo7g00547 1234 CDD Hr-like 48 174 - -
Mepo7g00547 1234 Gene3D nmb1532 protein domain like 305 453 - -
Mepo7g00547 1234 Gene3D nmb1532 protein domain like 44 194 - -
Mepo7g00547 1234 FunFam Zinc finger protein-related isoform 1 1113 1162 - -
Mepo7g00547 1234 Pfam Hemerythrin HHE cation binding domain 642 805 IPR012312 -
Mepo7g00547 1234 Pfam Hemerythrin HHE cation binding domain 57 176 IPR012312 -
Mepo7g00547 1234 Pfam Hemerythrin HHE cation binding domain 302 436 IPR012312 -
Mepo7g00547 1234 Gene3D nmb1532 protein domain like 638 877 - -
Mepo7g00547 1234 ProSiteProfiles Zinc finger CHY-type profile. 981 1051 IPR008913 GO:0008270
Mepo7g00547 1234 CDD Hr-like 644 804 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g00547 Mepo-Chr7 9199617 9208746 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g00547 1 1233 C2H2 Transcription Factor Family AT3G18290 66.057 0.0 1665
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g00547 K16276 - gmx:100791354 2109.72