Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g00543 ATGATGTTCTTCTCCAGGCTATGTTTCTGCTTGCAGAAGAAGCATGGCACAGGCTCTGAAGATGGTGGAGATGATGATAAAGACATGGTGGATGCTGGTGACTCTTGTAATCTGTTGTTTGAGCTCAATACTCTTCAGCTTGCTACTAATTTCTTCTCTGAGCTTAATCAACTTGGTCGTGGTGGCTTTGGTCCTGTTTTTAAGGGGTTGATGCCAAATGGTGAAGAAGTGGCTATTAAAAAGCTGTCAATGGAATCTAGACAAGGAATTAGAGAATTTACCAACGAAGTTAGGCTATTGCTAAGAATTCAGCACAAGAATTTAGTCACTTTACTAGGTTGTTGTGCAGAAGGACAAGAAAAGATGCTTGTCTATGAGTATCTACCAAACAAAAGCCTTGATCACTTTCTATTCGATAAAAAGAGGTCTTTGGATTGGATGACACGATTTCGAATAGTTACTGGTATCGCAAGAGGACTTCTCTACCTGCATGAAGAGGCCCCGGAAAGAATTATTCACAGAGACATTAAGGCTAGTAACATATTGCTTGACGAGAAATTAAATCCGAAAATTTCCGACTTCGGTTTGGCAAGGCTGTTTCCTGGAGAGGATACTCATGTGCAGACATTCAGGATTTCCGGTACACATGGTTACATGGCTCCTGAATATGCATTGCGTGGATATCTTTCTGTAAAGACCGATGTTTTCAGTTATGGAGTGTTGGTGTTGGAAATAGTTAGCGGGAGAAAAAATCATGATGTGAAGCTTGATGCAGAAAAGGCAGATCTCCTAAGCTATGCATGGAAACTTTATCAAGGAGGGAAGATTATGGATTTAATAGACCAAAACATTGGTAAATACAACGGCGATGAGGCTGCAATGTGCATTCAACTAGGTTTATTATGCTGTCAAGCAAGTTTAGCAGAAAGACCTGACATGAATTCAGTTAATCTTATGCTATCAAGCGATTCCTTCACTTTGCCAAGACCAAGTAGACCAGGAGTTCAAGGTCGTGTCGGAAAATGGAATACAACCACAACTTCTGCTTTGTCCAATACTAATGGTAGTAGTGCAACAAGAGCCTCAGGTGGTAGTAGTTTTGTAGAAGAATATTCTAGAAATTCTATCTCTACTTCTTCTTTTGATGAAGGTAGATAA 1158 0.4007 MMFFSRLCFCLQKKHGTGSEDGGDDDKDMVDAGDSCNLLFELNTLQLATNFFSELNQLGRGGFGPVFKGLMPNGEEVAIKKLSMESRQGIREFTNEVRLLLRIQHKNLVTLLGCCAEGQEKMLVYEYLPNKSLDHFLFDKKRSLDWMTRFRIVTGIARGLLYLHEEAPERIIHRDIKASNILLDEKLNPKISDFGLARLFPGEDTHVQTFRISGTHGYMAPEYALRGYLSVKTDVFSYGVLVLEIVSGRKNHDVKLDAEKADLLSYAWKLYQGGKIMDLIDQNIGKYNGDEAAMCIQLGLLCCQASLAERPDMNSVNLMLSSDSFTLPRPSRPGVQGRVGKWNTTTTSALSNTNGSSATRASGGSSFVEEYSRNSISTSSFDEGR 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g00543 385 CDD STKc_IRAK 58 320 - -
Mepo7g00543 385 Pfam Protein tyrosine and serine/threonine kinase 55 266 IPR001245 GO:0004672|GO:0006468
Mepo7g00543 385 MobiDBLite consensus disorder prediction 329 385 - -
Mepo7g00543 385 FunFam Cysteine-rich receptor-like protein kinase 41 128 326 - -
Mepo7g00543 385 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 28 127 - -
Mepo7g00543 385 MobiDBLite consensus disorder prediction 338 385 - -
Mepo7g00543 385 Gene3D Transferase(Phosphotransferase) domain 1 128 326 - -
Mepo7g00543 385 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672|GO:0006468
Mepo7g00543 385 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 7 377 - -
Mepo7g00543 385 Gene3D Phosphorylase Kinase; domain 1 20 127 - -
Mepo7g00543 385 SUPERFAMILY Protein kinase-like (PK-like) 40 333 IPR011009 -
Mepo7g00543 385 ProSiteProfiles Protein kinase domain profile. 52 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo7g00543 385 SMART serkin_6 52 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g00543 Mepo-Chr7 9157508 9161569 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g00543 37 334 Receptor kinase-like Gene Family AT4G21410 53.947 5.31e-111 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mepo7g00543 PK_Tyr_Ser-Thr 1.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g00543 - - tpra:123884781 674.855