Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g00542 ATGGCTGAATTTACAGAAAATTTTCAAAATATTATTAGACCCTCTTTTCCTTTTCTTGATTCTGATCAAAGCATGGAACTGTTGAATCAATTCATGGAAAATTCAAACATGAACATGATGCATAATTTGATGCCTTTTTCTTGTGACAGCATCTTGGAACATCATCAACAACAAGAACAAGAACATGTGTTTCCAAGAAACTTGGAAGAGAATTTTCATGGTCTTGTCCATCATGTCAATAATCAAAATCACAATGCAGTTCATGTTTCACTTCCAACAATTTTTCAAGAAGAAAATAAAGTTCATCATGAAGGTAAAAAAAGGAAAATGATGGATTTTCAAGAGACTAGTTCTGGAAATTCAACTCCTGCAGTTTCTGAAAGTGGAAGCAAAACTAAACTTAGTGGTGGAAGAGGAAAAAGAGTGAAAAGCTATGAAACAGAAGAAGAGAAAGCAAAAGAAGTTGTTCATGTTAGAGCAAGAAGAGGTCAAGCTACTGATAGTCACAGTCTAGCTGAAAGGGTTAGAAGAGGGAAAATCAATGAGAAATTGAAGTGCTTGCAAAATATTGTTCCAGGATGTTACAAGACCATGGGAATGGCAGTAATGTTGGATGAAATCATAAACTATGTTCAATCTTTGCAGCATCAAGTAGAATTTCTTTCTTTGAAGCTTACTGCAGCAAGTACTTATTATGATTTCAATTCAGAGACAGATGATCTAGAAACAATGCAGAGAGCAAGGGCATCTGAGGCAAAAGAGTTAGCAAGGTATAAGAGAGAAGGATATGGAGGAATTTCTTGCTTTCAACCAACTTGGCCACTTTGA 828 0.3527 MAEFTENFQNIIRPSFPFLDSDQSMELLNQFMENSNMNMMHNLMPFSCDSILEHHQQQEQEHVFPRNLEENFHGLVHHVNNQNHNAVHVSLPTIFQEENKVHHEGKKRKMMDFQETSSGNSTPAVSESGSKTKLSGGRGKRVKSYETEEEKAKEVVHVRARRGQATDSHSLAERVRRGKINEKLKCLQNIVPGCYKTMGMAVMLDEIINYVQSLQHQVEFLSLKLTAASTYYDFNSETDDLETMQRARASEAKELARYKREGYGGISCFQPTWPL 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g00542 275 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 62 238 IPR024097 GO:0006355
Mepo7g00542 275 MobiDBLite consensus disorder prediction 114 133 - -
Mepo7g00542 275 SMART finulus 170 220 IPR011598 GO:0046983
Mepo7g00542 275 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 162 231 IPR036638 GO:0046983
Mepo7g00542 275 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 164 214 IPR011598 GO:0046983
Mepo7g00542 275 Pfam Helix-loop-helix DNA-binding domain 168 215 IPR011598 GO:0046983
Mepo7g00542 275 CDD bHLH_AtBPE_like 154 239 - -
Mepo7g00542 275 MobiDBLite consensus disorder prediction 113 148 - -
Mepo7g00542 275 FunFam transcription factor BEE 3-like 161 232 - -
Mepo7g00542 275 Gene3D - 164 226 IPR036638 GO:0046983
Mepo7g00542 275 Coils Coil 241 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g00542 Mepo-Chr7 9067779 9070088 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g00542 38 275 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G73830 51.550 8.38e-64 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mepo7g00542 HLH 6.5e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g00542 - - gmx:100806942 397.512