LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo7g00534	ATGAACAAAACAAGATATGAGAATGCTATTAAAGCTTGTGCGTTGGATGAAGATATCAACGATTTGAGTCATGGAGATCTTACAGAAATAGGTCAAAGAGGGATTAACCTAAGTGGAGGACAAAAGCAAAGGATTCAACTAGCTCGAGCAGTTTACAACGATGCTGATATCTATCTCCTCGACGACCCTTTCAGTGCAGTTGATGCGCACACTGCTGCTATTCTGTTCAATGACTGCATTATGACTGCTCTAAGAGAAAAAACAGTCATTCTTGTGACACATCAAGTGGAGTTTCTCTCAAAAGTTGTTGATAAAATACTGGTAATGGAGGATGGAAAAGTTATTCAATCAGGTAGTTATGAGAATCTCCTAACAGCTGGAACAGCCTTTGAACAACTTGTGAACGCGCACAAAGACGCACTTACTGAGTTGAATCAAGATAACAAAAACCAAGGAGCTGAGACATCACTTGGAGTGGTTACTATAAGAGCATTCAACATGGTAGACAGACTTATGAAATACTACTTAAAACTTGTCGACACAGATGCTACGCTGTTCTTTCATTCTAATGTGGCCATGGAATGGATGGTTATAAGAATTGAGGCACTTCAAACTTTGACAGTTATCACTGCAGCATTGTTGCTTATTCTACTTCCTCATAGACATGTGTCTCCAGGACTTGTGGGACTGTCACTTTCTTATGCTTTTAATTTGACAGGAGCCCAAATATTTTGGACTAGATGGTTTTCCACCTTATCAAACAACATAATTTCTGTTGAAAGAATCAAGCAGTTCATCGACATTCCAGCCGAGCCTCCTGCCATTGTGGAGGATAACCGACCGCCATCTTCATGGCCTTCCAAGGGTATGATTGAAGTTCAACGCTTAGAGGCTTTGGAGAAATGTCACCTCAAGGAAACAATCAGCAGGCTACCAAGTCTCCTGGACTCTTCTGTGAGTGATGAAGGTGGAAATTGGAGCTTAGGGCAGCGCCAACTGTTTTGTCTTGGAAGAGTACTGCTCAAGAGAAACAAAATTCTAGTTCTAGATGAAGCTACAGCCTCCATTGACTCAGCCACAGATGCCATTCTACAAAGAGTAATTAGACAAGAATTTGCAGAATGCACTGTTATAACCATTGCTCACAGAATTCCAACTGTAATAGACAGTGACATGGTCATGATCCTTTCTTATGGGAAACTGGTGGAATATGATGAGCCTTCAAAGCTAATGGAAACCAACTCTTCATTTTCTAAGCTGGTAGCTGAGTATTGGTCTAGCTACAAGAAGAGTTCCATCCCAAACATTAGCTTACAGCAACAATAA	1326	0.408	MNKTRYENAIKACALDEDINDLSHGDLTEIGQRGINLSGGQKQRIQLARAVYNDADIYLLDDPFSAVDAHTAAILFNDCIMTALREKTVILVTHQVEFLSKVVDKILVMEDGKVIQSGSYENLLTAGTAFEQLVNAHKDALTELNQDNKNQGAETSLGVVTIRAFNMVDRLMKYYLKLVDTDATLFFHSNVAMEWMVIRIEALQTLTVITAALLLILLPHRHVSPGLVGLSLSYAFNLTGAQIFWTRWFSTLSNNIISVERIKQFIDIPAEPPAIVEDNRPPSSWPSKGMIEVQRLEALEKCHLKETISRLPSLLDSSVSDEGGNWSLGQRQLFCLGRVLLKRNKILVLDEATASIDSATDAILQRVIRQEFAECTVITIAHRIPTVIDSDMVMILSYGKLVEYDEPSKLMETNSSFSKLVAEYWSSYKKSSIPNISLQQQ	441

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo7g00534	441	PANTHER	ATP-BINDING CASSETTE SUB-FAMILY C	1	145	-	-
	Mepo7g00534	441	Gene3D	-	1	133	IPR027417	-
	Mepo7g00534	441	Gene3D	ABC transporter type 1, transmembrane domain	134	267	IPR036640	GO:0005524\|GO:0016020
	Mepo7g00534	441	ProSitePatterns	ABC transporters family signature.	37	51	IPR017871	GO:0005524\|GO:0016887
	Mepo7g00534	441	ProSiteProfiles	ABC transporter integral membrane type-1 fused domain profile.	158	241	IPR011527	GO:0005524\|GO:0016020\|GO:0055085\|GO:0140359
	Mepo7g00534	441	Gene3D	-	268	435	IPR027417	-
	Mepo7g00534	441	Pfam	ABC transporter	27	64	IPR003439	GO:0005524
	Mepo7g00534	441	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	3	136	IPR027417	-
	Mepo7g00534	441	ProSiteProfiles	ATP-binding cassette, ABC transporter-type domain profile.	176	423	IPR003439	GO:0005524
	Mepo7g00534	441	SUPERFAMILY	ABC transporter transmembrane region	152	273	IPR036640	GO:0005524\|GO:0016020
	Mepo7g00534	441	Pfam	ABC transporter	294	354	IPR003439	GO:0005524
	Mepo7g00534	441	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	294	422	IPR027417	-
	Mepo7g00534	441	FunFam	Multidrug resistance associated protein, putative	1	69	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo7g00534	Mepo-Chr7	8963821	8967451	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo7g00534	286	421	Calmodulin-binding Proteins	AT2G36910	30.435	1.22e-13	71.6

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo7g00534	-		-	gmx:100784827	263.077