Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g00474 ATGCCGACGCGAACCGTAGGAACAATAAAACAAGACTGGGAACCAGTGGTTCTCCACAAAACCAAACCAAAAGCACAAGACCTCCGTAACCCAAAAGCAATAAACCAAGCCCTCCGAACCGGAGCAGAAGTTTTAACAGTCAAAAAACCAACAGCCGGTTCAAACAAAAAAGCAACGGCCGGTCCGGTTTTAAACGCGAGGAAATTAGATGAAGCGGCTGAACCGGCAGCGTTGGAGCGGGTTGGTGGAGAAGTGAGACACGCGATACAGAAAGCGCGTTTGGATAAGAAGATGAGTCAGGGTGATTTAGCGAAATTGATTAATGAAAGGGTTCAGGTTGTTCAGGAGTATGAGAATGGTAAAGCTGTTATTAATCAAGGTGTTTTGGGGAAGATGGAGAAGGTTTTGGGGGTTAAACTTAGGGGTAAGATTGGAAAATAA 441 0.4535 MPTRTVGTIKQDWEPVVLHKTKPKAQDLRNPKAINQALRTGAEVLTVKKPTAGSNKKATAGPVLNARKLDEAAEPAALERVGGEVRHAIQKARLDKKMSQGDLAKLINERVQVVQEYENGKAVINQGVLGKMEKVLGVKLRGKIGK 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g00474 146 SUPERFAMILY lambda repressor-like DNA-binding domains 86 140 IPR010982 GO:0003677
Mepo7g00474 146 PANTHER ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 MULTIPROTEIN BRIDGING FACTOR 1 10 143 - -
Mepo7g00474 146 Pfam Helix-turn-helix 89 140 IPR001387 -
Mepo7g00474 146 Pfam Multiprotein bridging factor 1 11 81 IPR013729 -
Mepo7g00474 146 CDD HTH_XRE 88 140 IPR001387 -
Mepo7g00474 146 FunFam Multiprotein bridging factor 1 73 146 - -
Mepo7g00474 146 Gene3D - 73 146 IPR010982 GO:0003677
Mepo7g00474 146 SMART mbf_short4 88 143 IPR001387 -
Mepo7g00474 146 ProSiteProfiles Cro/C1-type HTH domain profile. 89 143 IPR001387 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g00474 Mepo-Chr7 8099891 8100653 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MBF1 Mepo7g00474 MBF1 1.4e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g00474 K03627 - cpap:110818571 218.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo7g00474 7 8099891 8100653 Mepo7g00474 7 8099891 8100653 ECH