Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g00470 ATGGCGGTGATTGATAGCGAACCGGTGAAGTCACCGTGTGGAGACGAAAATGCAATCCGAAAGGTTATGGGAAAACGCAAGACAAACGCCCCCACATCTACCGTAAAGCAATGTATCTGGAATTTTCCGACGACGAATTATCAAAAATATGTATTTACATCCATCGAACCTTATGTGGAGGAGGTGATGAAAACTGCATCTGATAGCAAGAGTTCTGTTGTTCTAGTACCCAACCTCCTCCGCGAAACAAACAACACTGATTTGCTTAATCTTTTCCAGCCTTATGGTAATGTGATCAGTGCCAAGGTTGCTGTTTGTCCGTACACTGGCGTGACCGGTAGATTTGGCTTTGTTTACTTTGAAAACAAGGACTATGCTCAGCGTGCTATTTACAAACTCGATGGGACTGTCCCCAACCATATCTGTTCCACTATCGGAGTTGAATGGACCGTCGACCCATCAACAACCTAA 471 0.4459 MAVIDSEPVKSPCGDENAIRKVMGKRKTNAPTSTVKQCIWNFPTTNYQKYVFTSIEPYVEEVMKTASDSKSSVVLVPNLLRETNNTDLLNLFQPYGNVISAKVAVCPYTGVTGRFGFVYFENKDYAQRAIYKLDGTVPNHICSTIGVEWTVDPSTT 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g00470 156 Gene3D - 58 154 IPR012677 -
Mepo7g00470 156 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 72 152 IPR000504 GO:0003723
Mepo7g00470 156 SUPERFAMILY RNA-binding domain, RBD 44 139 IPR035979 GO:0003676
Mepo7g00470 156 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 61 142 - -
Mepo7g00470 156 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 74 137 IPR000504 GO:0003723
Mepo7g00470 156 SMART rrm1_1 73 146 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g00470 Mepo-Chr7 8067555 8068197 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g00470 63 149 Eukaryotic Initiation Factors Gene Family AT3G11400 41.379 5.76e-12 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g00470 K13207 K02177 sluc:116040974 55.8398