Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g00450 ATGGGAATGGAGCAAAACAACGTGATTGCACCGTTCATTATGAAGACATACCACATGGTCAATGAACCAAACACAGATAACCTTATCAAGTGGGGCCCATCTAACAACAGTTTCATTGTTCTTGATCCCTTAGAATTCTCTCACTCTCTTCTCCCTCTCTTCTTCAAACACAACAATTTCTCTAGCTTTGTTCGTCAACTCAACACTTACGGTTTCAGAAAAGTGGATCCGGATAGATGGGAATTTGCAAATGAATGGTTTCTTAGAGGACAGAAACACTTGTTGAAGAACATAGTTAGGAAGAAACATGTTGGTGGTATTGGAAATGGAAGGAATAATAATTATTATAACAATAATAATTATTTTAATGAGGTCAAGTTTGAAGATTTAGAAGAAGATGAAGCTATGGTGACGGAAATAGCAAAGTTGAAAGAAGAACAAAGAAATTTAGAAGAAGAGCTTCAAGGAATGAACAAGAGATTAGAAACAACTGAGAAAAGACCACAACAAATGATGGCTTTTTTATGTAATGTCGTTGAAGATCCTCAAATTTTGTCTAGAATACTTAATGAAAGGGAGAGTAAAAAATTTGTTGATAAAAAGAAACGACGGTTGATATCTCCGGTGGCGGCGACAACATCGACTTCCTCGGAGTCGTCGGGCATGGCGGTGGCAAATTCGGTGAAGATGGAGTTTGAGGAAGATGAGGTAACGGTTTGTAATAACATAATGTCGACGTCGCCGGAGGTTGGTTTTGAAATTGATTATTTACACCGTGTGCCGCCGCAGGAGATGGCTCCGGTGGGTGGTTGGTGGGGGCAGACGGAGTTTGGACATATGGGTTATGGGCGTGGTTGTGAAGTTTCACGGATGCCGGTTGTGTCTCCAGCGGCGGCACCGATAATGTGGGGTGAGAATAGAAGTGATAGTAGTAAAAAAGGGGGTGTGGGAAATTTCAGTGAAATGGCGGCGGAGAATAGTAAGTTGCCACCTTATCCTTTTTCGTTGTTAGAAGGTGGCTTTTAG 1026 0.4133 MGMEQNNVIAPFIMKTYHMVNEPNTDNLIKWGPSNNSFIVLDPLEFSHSLLPLFFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEWFLRGQKHLLKNIVRKKHVGGIGNGRNNNYYNNNNYFNEVKFEDLEEDEAMVTEIAKLKEEQRNLEEELQGMNKRLETTEKRPQQMMAFLCNVVEDPQILSRILNERESKKFVDKKKRRLISPVAATTSTSSESSGMAVANSVKMEFEEDEVTVCNNIMSTSPEVGFEIDYLHRVPPQEMAPVGGWWGQTEFGHMGYGRGCEVSRMPVVSPAAAPIMWGENRSDSSKKGGVGNFSEMAAENSKLPPYPFSLLEGGF 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g00450 341 SUPERFAMILY "Winged helix" DNA-binding domain 9 101 IPR036390 -
Mepo7g00450 341 Coils Coil 133 167 - -
Mepo7g00450 341 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 8 232 IPR027725 -
Mepo7g00450 341 Pfam HSF-type DNA-binding 12 101 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mepo7g00450 341 SMART hsfneu3 8 101 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mepo7g00450 341 PRINTS Heat shock factor (HSF) domain signature 12 35 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mepo7g00450 341 PRINTS Heat shock factor (HSF) domain signature 63 75 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mepo7g00450 341 PRINTS Heat shock factor (HSF) domain signature 50 62 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mepo7g00450 341 Gene3D - 4 102 IPR036388 -
Mepo7g00450 341 FunFam Heat stress transcription factor B-4 4 102 - -
Mepo7g00450 341 ProSitePatterns HSF-type DNA-binding domain signature. 51 75 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g00450 Mepo-Chr7 7699531 7701267 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g00450 8 205 HSF AT3G24520 62.376 5.33e-81 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Mepo7g00450 HSF_DNA-bind 1.7e-30 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g00450 K09419 - gmx:100794896 374.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo7g00450 7 7699531 7701267 Mepo7g00450 7 7699531 7701267 ECH