Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g00437 ATGCCAACCGGAGTTCTCGTCGTTGGTGGTATCATCGTAGCAGTGCTCCTTCTTGTGGTGTCGATCATCTTTGGCATACGGTCTTGGTGTAGACGAAGTCAAGTTGATCGTGGTCCACAGCAACAACGGCAGCATAATGCTCACCTTCCTTCCAATCATATGGTCTCAAGACCTCCGTCTCATGCATTACGCTCCAGCAGGAGCATATTTTTAAGCTATGACGAGTTGGCGCGCGCAACCAATCGCTTCTCTGATGCTAACCGCCTAGGAGAAGGAGGATTTGGTTTTGTACACAAAGGTATTCTCCGTAATGGTAAAGAGGTTGCTGTTAAGCAGCTGAAAGCTGGTAGCAGTCAAGGAGAAATCGAATTTCAAACTGAAGTTGATACTATTAGCCGTGTTCATCACAGACATCTTGTCTCTCTTGTTGGATACTGCAGCACTGGTTCTCAGAGGCTACTTGCTTATGAGTTCGTTCCTAACAAAACATTGGCATTCCATTTACATGAAGGACAACCAACAATGGATTGGTCAAAAAGACTGAAAATTGCTTTAGGATCTGCAAAAGGACTTGCATATCTTCATGAAGATTGTCATCCTAAGATCATTCACCGTGATATTAAAGCTGCTAACATCCTTCTTGATTTTAAGTTTGAAGCAAAGGTTGCAGATTTTGGTCTGGCAAAGGATGCACCTGATCCCAAAACTCACGTTTCTACTCGAGTGAAGGGGACTTTCGGGTATATAGATCCAGGATATGCTCGTAGTGGACAACTTACTGATAAATCAGATGTTTACTCATATGGAGTCGTGCTCCTTGAGTTGTTAACAGGACGACTACCGATTGATAAATCTAACCCTGACATGCCCGTTAGTTTAGTGGAGCGGACTAGGCCTTTACTCACGGGTGCTTTAGAAGGAGATCATTGTGTAAATTCTCTAGTTGAAAAAAGGCTTAAGAAAGAATTTGACCGTAAAGAGATGACTCGTATGGTAGCATGTGCTGAAGCTTGCACGCGTCAGTTAGGAAAGGATCGACCAAAGATGAGCCAGGTTGTGCGAGTTCTAGAAGGAGTTGTGTCAATAGCAGATCTTAATGCAAGGGTTACACGTGGACACAGGAGATCTTAA 1131 0.4377 MPTGVLVVGGIIVAVLLLVVSIIFGIRSWCRRSQVDRGPQQQRQHNAHLPSNHMVSRPPSHALRSSRSIFLSYDELARATNRFSDANRLGEGGFGFVHKGILRNGKEVAVKQLKAGSSQGEIEFQTEVDTISRVHHRHLVSLVGYCSTGSQRLLAYEFVPNKTLAFHLHEGQPTMDWSKRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKDAPDPKTHVSTRVKGTFGYIDPGYARSGQLTDKSDVYSYGVVLLELLTGRLPIDKSNPDMPVSLVERTRPLLTGALEGDHCVNSLVEKRLKKEFDRKEMTRMVACAEACTRQLGKDRPKMSQVVRVLEGVVSIADLNARVTRGHRRS 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g00437 376 SMART serkin_6 83 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo7g00437 376 FunFam proline-rich receptor-like protein kinase PERK8 159 371 - -
Mepo7g00437 376 SUPERFAMILY Protein kinase-like (PK-like) 60 356 IPR011009 -
Mepo7g00437 376 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 60 158 - -
Mepo7g00437 376 Pfam Protein tyrosine and serine/threonine kinase 87 355 IPR001245 GO:0004672|GO:0006468
Mepo7g00437 376 ProSitePatterns Serine/Threonine protein kinases active-site signature. 202 214 IPR008271 GO:0004672|GO:0006468
Mepo7g00437 376 Gene3D Transferase(Phosphotransferase) domain 1 159 370 - -
Mepo7g00437 376 ProSitePatterns Protein kinases ATP-binding region signature. 89 111 IPR017441 GO:0005524
Mepo7g00437 376 MobiDBLite consensus disorder prediction 37 60 - -
Mepo7g00437 376 Gene3D Phosphorylase Kinase; domain 1 57 158 - -
Mepo7g00437 376 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 16 367 IPR047117 -
Mepo7g00437 376 ProSiteProfiles Protein kinase domain profile. 83 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g00437 Mepo-Chr7 7510144 7515319 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g00437 39 366 Trihelix Transcription Factor Family AT5G38560 57.402 1.71e-122 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Mepo7g00437 PK_Tyr_Ser-Thr 2.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g00437 - - fve:101298928 436.417