Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g00407 ATGGAAAGTTCTGAGAAATTTTCTCAAAGAAGTAACAATGGCTTGAACCTCAAGGCTACTGAGTTAAGACTTGGTTTACCTGGTTCTGAATCACCAGAGAGAGATAATGATCTTCTTGAAGAAAAAAATGCGTACTCTTTATGCATGCTTAAGGGTTTAGTTTCTGGAGCAAAAAGAGGTTTTTCAGATGCCATTGATATGAGAAGAAGTTGCAACCAACAAGGTTCTATTGCGAAAGATCAAATTCAACAGTCTTCAAATCCTTTGAATGAGAAGAAGAAGTCTCAGATTTCTGGTTCAGCTGCAAAGGAACAAGTTGTAGGATGGCCACCAATCCGTTCTTTCAGGAAGAATTCAATGGCCACTCAATCTCAAAAGAATGATATTGATGATGTAGAAGACAAATCTGAATGCCTTTATATAAAAGTGAGCATGGATGGTGCTCCATACTTGAGGAAAGTGGATCTCAAAAATTTTCACACTTACAAGGAACTATCTTCTGCACTAGAAAAGATGTTTAGTTGTTTTACAATCAGTCAATTTGGCTCTCATGGAGTTTTTGGTCAAGGAAATGTGTGCGAAAGTAGATTGATGGATCTCCTTCATGGCTCAGAATATGTCCTCACCTATGAAGATAAAGATGGTGATTGGATGCTAGTTGGTGATGTTCCATGGAAGATGTTCATCGACTCTTGCAAGAGGTTAAGGATAATGAAAAGTTCTGAAGCAATTGGATTAGCACCAAGAGCCATGGAAAAGTGCAAAAGTCGCAACTAG 777 0.3822 MESSEKFSQRSNNGLNLKATELRLGLPGSESPERDNDLLEEKNAYSLCMLKGLVSGAKRGFSDAIDMRRSCNQQGSIAKDQIQQSSNPLNEKKKSQISGSAAKEQVVGWPPIRSFRKNSMATQSQKNDIDDVEDKSECLYIKVSMDGAPYLRKVDLKNFHTYKELSSALEKMFSCFTISQFGSHGVFGQGNVCESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWKMFIDSCKRLRIMKSSEAIGLAPRAMEKCKSRN 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g00407 258 SUPERFAMILY CAD & PB1 domains 137 239 - -
Mepo7g00407 258 ProSiteProfiles PB1 domain profile. 138 240 IPR000270 GO:0005515
Mepo7g00407 258 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 15 245 IPR003311 GO:0005634|GO:0006355
Mepo7g00407 258 MobiDBLite consensus disorder prediction 75 105 - -
Mepo7g00407 258 Gene3D - 132 252 - -
Mepo7g00407 258 MobiDBLite consensus disorder prediction 1 18 - -
Mepo7g00407 258 FunFam Auxin-responsive protein 133 250 - -
Mepo7g00407 258 Pfam AUX/IAA family 20 249 IPR033389 -
Mepo7g00407 258 MobiDBLite consensus disorder prediction 1 35 - -
Mepo7g00407 258 MobiDBLite consensus disorder prediction 75 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g00407 Mepo-Chr7 7126421 7129521 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g00407 114 256 B3 DNA Binding Superfamily AT1G19850 29.371 3.37e-08 52.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Mepo7g00407 AUX_IAA 2.4e-87 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g00407 K14484 - gmx:100803754 365.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo7g00407 7 7126421 7129521 Mepo7g00407 7 7126421 7129521 ECH
Mepo2g04881 2 56983804 56987162 Mepo7g00407 7 7126421 7129521 PCT