Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g00402 ATGGGAAGTATTTTAAAAGATTTTATTCGTATTGATGATGATTATCTTCAAAGCTACCATGAAAAACTGGGAAGTTATGGTTCCATCGACATGAAAAAATCTCGTCGGAAGTATACATATGATAATACCATCTTTGATACGGTGTGGGAAGTGACGTACACTATCGACAGTTTCAAAGTTTTTGTCATTTTCATCATTACAAAGGCAGGCAAAGAGGCCAAAGTCAATACGGTATTCTTTGAACTCGAACAATATTCTCCAAGAGGTTTTCTTGGCTCCAAGAGGTTTTCAGTAGATATGGATACCTTTCTTGATGGAAAAGGTTTCATTAATACTACTACACATGGAAACATTCGAAGATTTATAAATCATAGTTGTTCTCCTAACCTATGTGTGAAAGATGTTATGCATGATCACAATGGTAAGAGTGTACCCCCGCAAAATGTGGTTCTCCTAACCTTGCTTTCTTATTTGATGAGCAATTTCCTGCTCGCCTAA 498 0.3635 MGSILKDFIRIDDDYLQSYHEKLGSYGSIDMKKSRRKYTYDNTIFDTVWEVTYTIDSFKVFVIFIITKAGKEAKVNTVFFELEQYSPRGFLGSKRFSVDMDTFLDGKGFINTTTHGNIRRFINHSCSPNLCVKDVMHDHNGKSVPPQNVVLLTLLSYLMSNFLLA 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g00402 165 Gene3D SET domain 63 154 IPR046341 -
Mepo7g00402 165 SUPERFAMILY SET domain 104 140 IPR046341 -
Mepo7g00402 165 Pfam SET domain 76 134 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g00402 Mepo-Chr7 7088689 7091320 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g00402 110 136 C2H2 Transcription Factor Family AT2G23740 70.370 9.33e-07 45.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mepo7g00402 SET 1.7e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g00402 - K11420 tpra:123891631 78.1814