Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g00390 ATGATGAATCAACTTGGTATCGCCCTTTTGATTCTCTCTACCTTATTCATCCATGTTAGAGCTCAATCACCAACATCACAAACTACAAATTCACAAGATGCTGTTTCAAATTTCCAACCAAGTCTTGTTGTTGTCATAGGAATCCTAGGTCTCATGTTTTCCTTAACATTCATTCTTCTTATTTTTGCCAAAGTATGTCACCGTAGACAATTACTACCTATAAGTGAAGATCCAAATAATCAATTAGCAACACTTATGAGATCAAGATCAAGATTTTCAGGAATTGACAAAACAGCTATTGAATCACTTCCTTTTTTCAAATTCTCTTCTCTCAAAGGTTCAAAACAAGGGTTGGAATGTTCAATATGTTTGTCGAAATTCGAAGACATAGAAATTTTAAGATTGTTACCAAAATGTAAACATGCTTTTCATATTGATTGTATTGATCATTGGCTTGAGAAACACTCAAGTTGTCCTATTTGTAGACATAAAGTCAACATTGAAGATCAAACAACCTTTGCTTATTCAAATAGTTTAAGGATGTTGGTAAGTGAAGAATCAAACATAGAGATCTTTGTTGAAAGAGAAGAAGATAATGATCAACATGGTTCATCAAGATTTAGTATTGGAAGCAGCTTTAGGAAAATTGGAAAAGGTACTATATTTAAGGAAGAAGAAAAAGGTATTATTTCAAAGGAAGAAGAATTGCTTATAGAAAAAAGTGATTCTAACAATAAGGCTTATCATAAACATAATCACAAGATTACTATATCTGATGTTGTGTTTAAGCATAGATGGAGTAATGTTAGTTCTTCTGATCTTATGTTTTTGAATTCAGAAATGATTAATGCTTCATCAAGTAACAGGTTCAACAACATCGAATCGAAAATTCAAGATTATGATGGTGAGAAAAGATCAGTGTCAGAAATCACTGGTGTTTCAAGATTTAGAGATTTTGACATGAAGAAAAGGGTGTTTGAAGATTCTTCTTTTGTTGAAAATAATCTTAAAGAGGAAAGAAGGAGAAAGCTTTGGTTTCCAATTGCAAGAAGAACAGCTGAATGGTTTGTGAATAGAGAAAAAAGGTCTCAACAATCTCAGAATAAACAACAGTCATTTGTTGATGTATAG 1131 0.3183 MMNQLGIALLILSTLFIHVRAQSPTSQTTNSQDAVSNFQPSLVVVIGILGLMFSLTFILLIFAKVCHRRQLLPISEDPNNQLATLMRSRSRFSGIDKTAIESLPFFKFSSLKGSKQGLECSICLSKFEDIEILRLLPKCKHAFHIDCIDHWLEKHSSCPICRHKVNIEDQTTFAYSNSLRMLVSEESNIEIFVEREEDNDQHGSSRFSIGSSFRKIGKGTIFKEEEKGIISKEEELLIEKSDSNNKAYHKHNHKITISDVVFKHRWSNVSSSDLMFLNSEMINASSSNRFNNIESKIQDYDGEKRSVSEITGVSRFRDFDMKKRVFEDSSFVENNLKEERRRKLWFPIARRTAEWFVNREKRSQQSQNKQQSFVDV 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g00390 376 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 22 361 - -
Mepo7g00390 376 SUPERFAMILY RING/U-box 99 168 - -
Mepo7g00390 376 ProSiteProfiles Zinc finger RING-type profile. 120 162 IPR001841 -
Mepo7g00390 376 CDD RING-H2_EL5-like 119 162 - -
Mepo7g00390 376 SMART ring_2 120 161 IPR001841 -
Mepo7g00390 376 FunFam RING-H2 finger protein ATL43 95 169 - -
Mepo7g00390 376 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 94 171 IPR013083 -
Mepo7g00390 376 Pfam Ring finger domain 119 162 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g00390 Mepo-Chr7 6909951 6911421 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g00390 18 370 C3H Transcription Factor Family AT2G20030 45.974 2.52e-105 313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo7g00390 7 6909951 6911421 Mepo7g00390 7 6909951 6911421 ECH