Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g00387 ATGAATGATAGTGATACTAATACCTCACTACTACAATCATTGGCTTGTTCAAGTGAAGAAAAAAAGAGAGGAAAAAAGCAAGATAATGGCAACAACAACAATAACAAAAAGAGTGATAACCCTAATCATCCACTTTATAGAGGAGTTAGAATGCGAACTTGGGGAAAATGGGTATCCGAAATCCGCGAACCACGAAAGAAAAGTCGAATCTGGCTCGGAACGTATTCTACACCTGAAATGGCGGCTCGTGCACACGACGTGGCTGCACTTGCCTTGAGAGGCTCATCGGCAATCCTTAACTTCCCTGAACTTTCAGCTTCACTTCCTCGACCAGCTTCTAACTCTCCAAGAGATATTCAAGCCGCAGCCGCCAAAGCCGCTTCTATGGTTGCTCATCCTCCTTCTCTGACGCCATCATCTTCGTTGTCTTCTTCTTCAACTCCGTATGATCTTGGTGAGATTGTTGAACTACCACAACTGGAAACATATTTTGAGTCACCCGACCCGAACAACGAATTTGTGTTTTTGGACCCGGTTGATTATTCTCACTCATGGTATCATAGCATCTATAGTGATGAAGAAGATAATGATTATGGTAGTGAATGCAACTTCAACATGGTATCAATGCATGACCCAGAAAATACGTTTCTTAACGTTACTTGCCCTTTTTAG 672 0.4241 MNDSDTNTSLLQSLACSSEEKKRGKKQDNGNNNNNKKSDNPNHPLYRGVRMRTWGKWVSEIREPRKKSRIWLGTYSTPEMAARAHDVAALALRGSSAILNFPELSASLPRPASNSPRDIQAAAAKAASMVAHPPSLTPSSSLSSSSTPYDLGEIVELPQLETYFESPDPNNEFVFLDPVDYSHSWYHSIYSDEEDNDYGSECNFNMVSMHDPENTFLNVTCPF 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g00387 223 SMART rav1_2 45 108 IPR001471 GO:0003700|GO:0006355
Mepo7g00387 223 MobiDBLite consensus disorder prediction 1 47 - -
Mepo7g00387 223 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 27 162 - -
Mepo7g00387 223 Gene3D AP2/ERF domain 45 103 IPR036955 GO:0003700|GO:0006355
Mepo7g00387 223 FunFam Ethylene-responsive transcription factor 2 44 103 - -
Mepo7g00387 223 MobiDBLite consensus disorder prediction 1 16 - -
Mepo7g00387 223 SUPERFAMILY DNA-binding domain 45 102 IPR016177 GO:0003677
Mepo7g00387 223 ProSiteProfiles AP2/ERF domain profile. 45 102 IPR001471 GO:0003700|GO:0006355
Mepo7g00387 223 PRINTS Ethylene responsive element binding protein signature 68 84 IPR001471 GO:0003700|GO:0006355
Mepo7g00387 223 PRINTS Ethylene responsive element binding protein signature 46 57 IPR001471 GO:0003700|GO:0006355
Mepo7g00387 223 MobiDBLite consensus disorder prediction 18 32 - -
Mepo7g00387 223 CDD AP2 44 104 IPR001471 GO:0003700|GO:0006355
Mepo7g00387 223 Pfam AP2 domain 44 94 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g00387 Mepo-Chr7 6838448 6839119 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g00387 26 181 AP2-EREBP Transcription Factor Family AT5G11590 54.286 2.65e-54 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo7g00387 AP2 2.5e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g00387 K09286 - gmx:100804801 216.468