Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g00386 ATGCGAACTTGGGGAAAATGGGTATCCGAAATCCGCAAACCACGGAAGAAAAGTCGAATCTGGCTCGGAACATACGCCACAGCTGAAATGGCGGCGCGTGCACACGACGTGGCTGCACTTACCTTAAAAGGCTCATCGGCAATCGTTAACTTCCCTGAACTTTCAGCTTCACTTCCTCATCCAGTTTCTAACTCGCCAAGAGATATTCAAGCTGCAGCCGCCAAAGCCGCTTCCATGGTTGCTCAACCAACTTCTCTGATGCCATTATCTTCGTTTTTTTCTTCTTCAACTCCGTATGATCTTGGTGAGATTGTTGAACTACCACAACTCGAAACATATTTAGAGTCACCAGACCCAAACAACGAATTTGTGTTTTTGGACCCGGTTGATTATTCTCAGTTATGGTATCATAACATCTTTGGTGATGAAGAAGAGAATGGTTATGGTAATGGATGCAACTTCAACATGATATCAATGCATGACCCAGAAAATATGTTTCTTAACGTTACCTACCCTTTTTAG 522 0.4349 MRTWGKWVSEIRKPRKKSRIWLGTYATAEMAARAHDVAALTLKGSSAIVNFPELSASLPHPVSNSPRDIQAAAAKAASMVAQPTSLMPLSSFFSSSTPYDLGEIVELPQLETYLESPDPNNEFVFLDPVDYSQLWYHNIFGDEEENGYGNGCNFNMISMHDPENMFLNVTYPF 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g00386 173 SUPERFAMILY DNA-binding domain 2 52 IPR016177 GO:0003677
Mepo7g00386 173 SMART rav1_2 1 58 IPR001471 GO:0003700|GO:0006355
Mepo7g00386 173 FunFam Ethylene-responsive transcription factor 2 1 53 - -
Mepo7g00386 173 Pfam AP2 domain 3 44 IPR001471 GO:0003700|GO:0006355
Mepo7g00386 173 CDD AP2 1 54 IPR001471 GO:0003700|GO:0006355
Mepo7g00386 173 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 1 112 - -
Mepo7g00386 173 Gene3D AP2/ERF domain 1 53 IPR036955 GO:0003700|GO:0006355
Mepo7g00386 173 ProSiteProfiles AP2/ERF domain profile. 1 52 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g00386 Mepo-Chr7 6829985 6830506 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g00386 1 155 AP2-EREBP Transcription Factor Family AT5G11590 51.124 8.46e-47 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo7g00386 AP2 1.5e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g00386 K09286 - gmx:100804801 194.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo7g00386 7 6829985 6830506 Mepo7g00386 7 6829985 6830506 ECH
Mepo2g04866 2 56886223 56887434 Mepo7g00386 7 6829985 6830506 PCT