Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g00352 ATGCATTACATTTTCAGCATGTTGTCATTTCTTCTTCTTGTACAAAATCTCAACACAATACATTGTCATACAAAAGGAATTCGACCGATACGTTCGGCCCGAAACGGTTTATCAACCAACAACACAACAAGAGCAGACTTAGCAGAACAGCAATTCATGAAATGGGTTAGTTTTGTTGGTAATCTTAAACACACTGTTTACAAGGCTGCAAAAAACAAGCTCTTTGCTTCTTATACTTTGCACGTTGATAAGAATCCTTCTTTTGGAGATTTTGATACAATTCAAGATGCCATTGATTCTCTTCCTTCCATCAATCTTGTTAGAGTTGTCATCAAGGTTCATGCAGGGGTTTACACGGAAAAAGTTAACATTCCTCCTTTAAAATCCTTCATAACCATAGAAGGAGATGGTGCAGATACAACAATTGTTCAATGGGGTGACACTGCTGCAACACCTGGTCCAAGAGGGAATCCATTGGGAACATATGGTTCAGCAACTTTTGCAGTTAATTCACCTTATTTCATTGCTAAGAACATCACATTCAAAAACACTTTTCCTCTTCCTGCACCTGGAGCAATTGGAAAACAAGCGGTTGCATTTAGAATTTCAGCAGACACAGCATCATTCTTAGGCTGCAAATTTTTGGGAGCACAAGATACACTTTATGATCATATTGGTAGACATTACTATAAAGATTGTTACATTGAAGGTTCTGTTGATTTCATCTTTGGCAATGCTCTATCTCTATTTGAGGGATGTCACGTGCATGCAATAGCAAGAAATACAGGAGCACTAACAGCACAAGGAAGGAGCAGTATGTTACAAGACACAGGTTTCTCATTTGTAAACTGTAAGGTCACGGGGTCAGGAGCACTATACCTTGGAAGAGCTTGGGGTCCTTTTTCACGAGTTGTCTTTGCTTATACAGATATGGACAATATCATTATTCCTAAAGGATGGTATAATTGGGGTGATCCTAACCGTGAAATGACGGTGTTCTATGGACAATACAAATGCACAGGACCTGGAGCAAGTTTTGCAGGGAGAGTATCATGGTCAAGAGAACTCACTGATGAAGAAGCTAGACCTTTTCTTTCACTTAACTTTATTGATGGGACTGAATGGATCAATTTTTAG 1137 0.3896 MHYIFSMLSFLLLVQNLNTIHCHTKGIRPIRSARNGLSTNNTTRADLAEQQFMKWVSFVGNLKHTVYKAAKNKLFASYTLHVDKNPSFGDFDTIQDAIDSLPSINLVRVVIKVHAGVYTEKVNIPPLKSFITIEGDGADTTIVQWGDTAATPGPRGNPLGTYGSATFAVNSPYFIAKNITFKNTFPLPAPGAIGKQAVAFRISADTASFLGCKFLGAQDTLYDHIGRHYYKDCYIEGSVDFIFGNALSLFEGCHVHAIARNTGALTAQGRSSMLQDTGFSFVNCKVTGSGALYLGRAWGPFSRVVFAYTDMDNIIIPKGWYNWGDPNREMTVFYGQYKCTGPGASFAGRVSWSRELTDEEARPFLSLNFIDGTEWINF 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g00352 378 Gene3D - 75 378 IPR012334 -
Mepo7g00352 378 Pfam Pectinesterase 89 372 IPR000070 GO:0030599|GO:0042545
Mepo7g00352 378 ProSitePatterns Pectinesterase signature 2. 235 244 IPR033131 -
Mepo7g00352 378 SUPERFAMILY Pectin lyase-like 76 377 IPR011050 -
Mepo7g00352 378 FunFam Pectinesterase 76 378 - -
Mepo7g00352 378 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 72 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g00352 Mepo-Chr7 6367235 6372628 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g00352 1 376 Carbohydrate Esterase AT5G47500 42.706 5.93e-101 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g00352 K01051 - gmx:100793314 657.521