Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mepo7g00338 | ATGTCGTGGCAAACTTATGTGGATGAACATTTGATGTGTGATATCGACGGCACTGGCCATCACCTCACCGCGGCTGCCATTCTTGGCCATGACGGTTCTGTTTGGGCTCAGAGCACTTCATTCCCTCAATTTAAGCCTGATGAGATTACTGGTATCATGAAAGATTTCGACGAACCAGGACATCTTGCACCTACTGGCATGCACCTTGGGGAAATCAAGTACATGGTTATTCAAGGAGAGCCTGGAGCTGTCATTCGTGGGAAGAAGGGATCTGGAGGTATAACAATAAAGAAAACTGGGCAAGCTCTAGTTTTTGGCATCTATGAAGAACCTGTTACTCCTGGACAGTGCAACATGGTTGTTGAGAGGTTGGGAGATTACCTTGCTGAACAAGGTCTCTAG | 402 | 0.4677 | MSWQTYVDEHLMCDIDGTGHHLTAAAILGHDGSVWAQSTSFPQFKPDEITGIMKDFDEPGHLAPTGMHLGEIKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEPVTPGQCNMVVERLGDYLAEQGL | 133 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mepo7g00338 | 133 | CDD | PROF | 2 | 132 | IPR005455 | GO:0003779 | |
| Mepo7g00338 | 133 | SMART | prof_2 | 1 | 133 | IPR005455 | GO:0003779 | |
| Mepo7g00338 | 133 | FunFam | Profilin | 1 | 133 | - | - | |
| Mepo7g00338 | 133 | Pfam | Profilin | 1 | 132 | IPR005455 | GO:0003779 | |
| Mepo7g00338 | 133 | PRINTS | Plant profilin signature | 54 | 68 | IPR005455 | GO:0003779 | |
| Mepo7g00338 | 133 | PRINTS | Plant profilin signature | 119 | 132 | IPR005455 | GO:0003779 | |
| Mepo7g00338 | 133 | PRINTS | Plant profilin signature | 73 | 82 | IPR005455 | GO:0003779 | |
| Mepo7g00338 | 133 | PRINTS | Plant profilin signature | 1 | 14 | IPR005455 | GO:0003779 | |
| Mepo7g00338 | 133 | PRINTS | Plant profilin signature | 29 | 42 | IPR005455 | GO:0003779 | |
| Mepo7g00338 | 133 | PRINTS | Plant profilin signature | 106 | 119 | IPR005455 | GO:0003779 | |
| Mepo7g00338 | 133 | PRINTS | Plant profilin signature | 86 | 101 | IPR005455 | GO:0003779 | |
| Mepo7g00338 | 133 | SUPERFAMILY | Profilin (actin-binding protein) | 2 | 132 | IPR036140 | - | |
| Mepo7g00338 | 133 | ProSitePatterns | Profilin signature. | 1 | 8 | IPR027310 | GO:0003779 | |
| Mepo7g00338 | 133 | Gene3D | Dynein light chain 2a, cytoplasmic | 1 | 133 | - | - | |
| Mepo7g00338 | 133 | PRINTS | Profilin signature | 23 | 32 | IPR005455 | GO:0003779 | |
| Mepo7g00338 | 133 | PRINTS | Profilin signature | 3 | 12 | IPR005455 | GO:0003779 | |
| Mepo7g00338 | 133 | PRINTS | Profilin signature | 42 | 62 | IPR005455 | GO:0003779 | |
| Mepo7g00338 | 133 | PRINTS | Profilin signature | 66 | 80 | IPR005455 | GO:0003779 | |
| Mepo7g00338 | 133 | PRINTS | Profilin signature | 115 | 132 | IPR005455 | GO:0003779 | |
| Mepo7g00338 | 133 | PRINTS | Profilin signature | 102 | 115 | IPR005455 | GO:0003779 | |
| Mepo7g00338 | 133 | PANTHER | PROFILIN | 1 | 132 | IPR005455 | GO:0003779 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mepo7g00338 | Mepo-Chr7 | 6163930 | 6165714 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mepo7g00338 | 1 | 133 | Cytoskeleton Gene Families | AT4G29340 | 84.328 | 7.85e-82 | 234 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mepo7g00338 | K05759 | - | tcc:18588487 | 249.21 |