Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g00329 ATGATGCTGAGAGCTAATCCAACGGTTCATGTTCCTCCTTGGCCGAATCATGATGATCCAACGGCTGAGATTCTTTCTTCTTGTTTCGGTTACGATAACAATGCCGGCGATCTCACCGGCGCCGGAGATTTTTCCACCGGTGATTACTCTGCCGGAGATTACTATCTCCGGGAAGCACTTGCAGCGCTTCAACGTTATCTTCCGTCAAACGAGTTCAACAACGATTCTGATTCGGAATCTCCGGCGACGGCGGCGGCGGATTCAACGGTGGATGCATATTCATGTGATCATTTCCGTATGTACGAGTTCAAGATAAGAAGATGTGCACGTGGAAGATCACATGACTGGACGGAGTGTCCATACGCACATCCCGGAGAAAAGGCACGCCGCCGTGATCCGAGGAAGTTTCATTACTCCGGCACGGCGTGTCCTGATTTTCGTAAGGGAAACTGTAAGAAAGGTGATGCGTGTGAACACGCGCATGGTGTTTTCGAGTGTTGGCTTCATCCTGCTCGTTACCGTACTCAGCCGTGTAAAGACGGAACCAGCTGTCGCCGGCGTGTTTGTTTTTTCGCTCACACGCCGGAACAGCTCCGTCTTAACGTTCAACAAAGTCCTTCATCGTCTCGAGATTCGTATGATGGTTCTCCGTTACGACAAATGGTTACTATAACAACGCCGCCAGAATCTCCCTCGCCACCGATGTCACCGATGGCGAACGAGATGGTGGCGTCGTTACGTAATTTACAATTGGGGAGAATGAAAACTATGCCAATTAATAGAAATGTTACAATTGGTTCACCGGTTTTCGGTTCTGGTTCACCGGTTTTTGGGTCACCGCTTCGGTCCGGTTTTTTAAGTTTACCTAATACACCAACAAAAAAACCGGGTTTAGGCCGGGTTGGTGGGTTTGATTTATGGGATCAGAGTTGTGAAGAGGAGCCTATAATGGAGAGAGTTGAGAGTGGAAGAGATATTAGGGCTAAGATGTTTGAGAAATTAAGCAAAGAAAATTCATTGGAGAATGAGAATGGGAATTCGGGTTTGGGTTTGGAGTTGGGTCAACCCGGTCCAGATGTTGGGTGGGTTTGTGATTTGTTGAAGTGA 1107 0.4806 MMLRANPTVHVPPWPNHDDPTAEILSSCFGYDNNAGDLTGAGDFSTGDYSAGDYYLREALAALQRYLPSNEFNNDSDSESPATAAADSTVDAYSCDHFRMYEFKIRRCARGRSHDWTECPYAHPGEKARRRDPRKFHYSGTACPDFRKGNCKKGDACEHAHGVFECWLHPARYRTQPCKDGTSCRRRVCFFAHTPEQLRLNVQQSPSSSRDSYDGSPLRQMVTITTPPESPSPPMSPMANEMVASLRNLQLGRMKTMPINRNVTIGSPVFGSGSPVFGSPLRSGFLSLPNTPTKKPGLGRVGGFDLWDQSCEEEPIMERVESGRDIRAKMFEKLSKENSLENENGNSGLGLELGQPGPDVGWVCDLLK 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g00329 368 SMART c3hfinal6 137 163 IPR000571 GO:0046872
Mepo7g00329 368 SMART c3hfinal6 172 195 IPR000571 GO:0046872
Mepo7g00329 368 PANTHER UNKEMPT FAMILY MEMBER 58 367 IPR045234 -
Mepo7g00329 368 FunFam Zinc finger CCCH domain-containing protein 66 95 163 - -
Mepo7g00329 368 Gene3D - 133 209 - -
Mepo7g00329 368 ProSiteProfiles Zinc finger C3H1-type profile. 138 164 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g00329 Mepo-Chr7 5992860 5994583 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g00329 93 199 C2H2 Transcription Factor Family AT5G12850 73.832 5.07e-56 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mepo7g00329 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g00329 - - aprc:113867365 474.937