Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g00328 ATGGGAAGGGCTCCATGTTGTGACAAATCAAAAGTGAAAAGAGGTCCATGGTCTAATGAAGAAGATGATATTCTCAAACACTACATTCAAGAAAATGGCAATGCTGGAAATTGGATATCTCTCCCCCTAAAAGCAGGTTTAAATCGTTGCGGGAAGAGTTGTCGTCTAAGATGGTTGAACTATTTAAGGCCTAATATAAAGCTTGGAGGTTTCACTAAAGAGGAAGACAGCATTATCTGCACCCTTTTTAGCACCATAGGAAGCAGGCAAGTCCATTACTTATTATCAATAGTTTCTATTTGCCATTGGTGGTCCTTTATAGCAGCTCAATTACCAGGAAGAACAGATAATGATGTGAAAAATCACTGGAACACTAAACTAAAGAAAAAGTATGTAGCAGGAAACACTTCCACAAGCAGCAATATTTACACTTTCAACAATACTACTAGTTCTGACCACTTTTCAAGTACTTTGACTTTTCAACCTCAACTTGAAGCACCCTTTGTCTTTGATCAAAAACCGAACACACCTTGTTTTGACTCCTACAATATTTTGGATTTGCAAGAAACACCAATTAATAATATTCCTTTACCAATTAAAATGGAATCAGAAGCTTTTTATACTGGAAGCAGCTTTAGTAGTAGCTGTAGTACTACACCAACCACCAAAGAAATTTCAAGTTTTTCAAGTGCAACTTTCTTAGAAGAGCAAAACAATGATAATCAATGTTTTGAATATGACCATGATGATGCAATTCTTCTTGAAATGTTTCTTGATGATTTATTGAATCATGGACCCTCATCTGGATAA 810 0.358 MGRAPCCDKSKVKRGPWSNEEDDILKHYIQENGNAGNWISLPLKAGLNRCGKSCRLRWLNYLRPNIKLGGFTKEEDSIICTLFSTIGSRQVHYLLSIVSICHWWSFIAAQLPGRTDNDVKNHWNTKLKKKYVAGNTSTSSNIYTFNNTTSSDHFSSTLTFQPQLEAPFVFDQKPNTPCFDSYNILDLQETPINNIPLPIKMESEAFYTGSSFSSSCSTTPTTKEISSFSSATFLEEQNNDNQCFEYDHDDAILLEMFLDDLLNHGPSSG 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g00328 269 SMART sant 67 129 IPR001005 -
Mepo7g00328 269 SMART sant 13 64 IPR001005 -
Mepo7g00328 269 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Mepo7g00328 269 Pfam Myb-like DNA-binding domain 71 125 IPR001005 -
Mepo7g00328 269 FunFam Transcription factor RAX3 7 68 - -
Mepo7g00328 269 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 66 IPR017930 -
Mepo7g00328 269 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 104 131 IPR017930 -
Mepo7g00328 269 PANTHER OS09G0431300 PROTEIN 1 230 - -
Mepo7g00328 269 ProSiteProfiles Myb-like domain profile. 63 127 IPR001005 -
Mepo7g00328 269 CDD SANT 16 62 IPR001005 -
Mepo7g00328 269 Gene3D - 70 153 - -
Mepo7g00328 269 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Mepo7g00328 269 SUPERFAMILY Homeodomain-like 12 123 IPR009057 -
Mepo7g00328 269 Gene3D - 6 68 - -
Mepo7g00328 269 CDD SANT 71 127 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g00328 Mepo-Chr7 5976154 5977797 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g00328 1 132 MYB Transcription Factor Family AT3G49690 66.667 1.49e-60 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mepo7g00328 Myb_DNA-binding 6.9e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g00328 K09422 - gmx:778160 279.256