Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g00302 ATGGGCAGAAAGTGCTCACATTGTGGAAACATAGGTCATAATTCAAGGACTTGTAATTCATTAAGAGGAAGTAGTAGTTTTGTTGGAGTTAGACTTTTTGGTGTTCAACTTGATTTATCTTCTTCTTGTGTTTCCATGAAAAAGAGTTTTAGCATGGATTCTTTTCCTACTTCATCTTCTTCTCCTACTTCTTCCTTTTCTTCTTCAAGATTAACAATTGATGATAGAGCCTCTATTGGTTATCTTTCAGATGGTCTCATAGTTCGTACACAAGAAAGGAAAAAAGGAGTTCCATGGACAGAAGAAGAGCATAGAAAATTTCTTGTTGGACTTGAGAAGCTTGGAAAAGGAGATTGGAGGGGTATCTCTAGAAACTATGTGACTACAAGAACACCAACACAAGTTGCAAGCCATGCTCAAAAGTATTTTATTCGACTTGCAACCTTGAATAAGAAGAAGAGACGTTCAAGTCTCTTTGACATGGTTGGCAGTGGCAAGACAAACAAAACAGTTGATCCAAATAACATCTCAAAAAGCAAGTCAGGTGATTCAGTTTGTAGACATGATCATGAAGTTGAGAAGGATGCAACTTTGTCACTACTAATAAACTCACTTCAACAACAAACCAAATCAGATGATTATGATATGCAAAAAATTGAAGATGTTGAAGTTGAAGATTCTGAAGAAGCAGAACATAAAGATGTGCCAGATTGGCTACATCCTCTAACAAAGTCTTTAAATATGACATTGGTGATACCAAATTCTTCAAATGTAGCACCACCTGATCTTGAGCTAAGTCTGGCAGGGTCCAAGTCAAATAATATGGAACAAGATAATACATCCCCAAGTTCATTTCTTATTGGGCCAATTAGTGTGACTTAA 882 0.3639 MGRKCSHCGNIGHNSRTCNSLRGSSSFVGVRLFGVQLDLSSSCVSMKKSFSMDSFPTSSSSPTSSFSSSRLTIDDRASIGYLSDGLIVRTQERKKGVPWTEEEHRKFLVGLEKLGKGDWRGISRNYVTTRTPTQVASHAQKYFIRLATLNKKKRRSSLFDMVGSGKTNKTVDPNNISKSKSGDSVCRHDHEVEKDATLSLLINSLQQQTKSDDYDMQKIEDVEVEDSEEAEHKDVPDWLHPLTKSLNMTLVIPNSSNVAPPDLELSLAGSKSNNMEQDNTSPSSFLIGPISVT 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g00302 293 SUPERFAMILY Homeodomain-like 92 146 IPR009057 -
Mepo7g00302 293 FunFam transcription factor MYB1R1 97 148 - -
Mepo7g00302 293 ProSiteProfiles SANT domain profile. 99 147 IPR017884 -
Mepo7g00302 293 CDD SANT 98 143 IPR001005 -
Mepo7g00302 293 SMART sant 95 145 IPR001005 -
Mepo7g00302 293 MobiDBLite consensus disorder prediction 263 293 - -
Mepo7g00302 293 Gene3D - 97 149 - -
Mepo7g00302 293 ProSiteProfiles Myb-like domain profile. 91 143 IPR001005 -
Mepo7g00302 293 PANTHER TRANSCRIPTION FACTOR KUA1 3 248 - -
Mepo7g00302 293 Pfam Myb-like DNA-binding domain 98 143 IPR001005 -
Mepo7g00302 293 ProSiteProfiles Zinc finger CCHC-type profile. 3 18 IPR001878 GO:0003676|GO:0008270
Mepo7g00302 293 NCBIfam myb-like DNA-binding domain, SHAQKYF class 94 145 IPR006447 GO:0003677
Mepo7g00302 293 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 91 147 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g00302 Mepo-Chr7 5605650 5607737 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mepo7g00302 Myb_DNA-binding 7.6e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g00302 - - gmx:778052 280.411