Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g00299 ATGTTGAAGAGAGAGCAATGTGACCACACTAAACATGATTCTAGCTTCTCTCATTGGAAGATTCTCATTGGTCCTTATGATTGGGGAAACTGTCAAAACTTGCCACAAAATTCCGGTCCGGGAGTGTATGAGCTTGGTGTAGGTTCGTCGACTAGTGATTTAGGGCGTGAAATCTACAAGCTTGTGACCGACCCTCATCGCGTATTAGCGGTTTATATAGGAAAATCTGATAATGTGAAAAAAATACTCCGAAGTTATGGCAGAGATGGATCTCATTTGGGTGATAATTGTTCATCAGGCTCATTGTTTAATGAGATCTTTTTTCGAGGGTTCCCAATTGTTTATAGATGGGCTGCTAGTAAAATCTCAAATGCTCTCGAGACATTTGATTATGCATGGAACAAAGTTGATAACGGTAAACGACGGTCCAATGATATTCTTCAAATGCTCAACATAATTTCTTCAAACAAGTTGCCTATGACAGCCGACAAATTAGATGAAGTTGAAAAAAATAGTAGTTTTGTTGACGAGAGTATCACAAAAAATGATGTTGGTACGTCGGAGGTGGCTTCGGAAGTTGAGGTTAACCATCAACTCGCACACGATAAATCAGATAATACTGAAAATAATAGTAGTTTTGTTGACGAGAGTATCACAAAAAATGATGTTGGTACGTCAGAGGTGGCTTCGAAAGTTGAGGTTAACCATCAACTCGCAGACGATAAATCAGATGAAACTGAAAATAATAGTAGTTTTGTTGACGAGAGTATCACAAAAATTGATGTCGGTACGTCAGAGGTGGCTTTGGAAGTTGAGGTTGAGCATCAGTTTGCAAACGACAAATCAGATGAAGCTGAAAATAATAGTAGTTTTGTTGACGAGAGTATCATAAAAAATGATGTTGGTACGTCAGAGGTGGCTTTGGAAATTGAGGTTAACCATCAGCTCGCAGACGACAAATCATACGAAGCTGAAAATAATAGTAGTTTTGTTGACAAGAGTATCACAAAAAATGATGTTGGTACGTTAGAGGTGGCTTTGGAAGCTGAGGTTGACCATCAGCTCGCTGAGGCATCTCCTTTAAAGAAGAAAGGGAGGAGTGATAAAAGTGAGGCAAACAAGAATAAAGATGGTATTGTTTGTACAAAGCCACCAGTTGAGAAAAGATTTAGCTGCCATGAACATAAAGGAATGAGAATAAATTTGTTTAGTGCAAAAGCAATAAGAAGATCCAAGTTTGAATCAGAAATCTTGGCCGGGAGTTTTGTTGACGAGAGTATCACCAAAAATGATGTTGGTACATCTGAGGTGGTTTTGGAAGCTAAGGTCGACCATCAACTCGCCGAGGCATTTCCTTTAAAGAAGAAAGGGAAGAATGATAAAGGTGAGGCAAACAAGAAGATGGTCGAGTGCTTTCTTGAGGTTAAAACTGACCGCTCCTTGTGGAACAAGAACTTCGATCGTGCTGGCTTCGTGAAGGATCATTTTAACCTTTATGAAGATTTTGAGGCAACAAGGAAGTCTAATCACTCCAATATGTTTCATGATGCTAGTGTTTTTTGTCTGCGCTCTGTGGTGTTGCTTGAAGTGATGGAGGAAGAGTTTCAGGCAGTAAAATCAAACGCAGATAGGCTAAAGCAGGAGAACGAAGACTTGAAGTTGAGGGTTAAAACCTTGGAGGATCAGTTGAAGGAATCTAGCAACTCCTCAAAGACGACGAAGGATGTGAAAAAGAAAGATGAGGAAGATAAGCGAGATATTGAAGCGAATAAGTGCGTGGAGCTTAATAACAATTTTGGTGTCATAAAGGGGGAGGTTGAGAAGGACGTTAAGAAGATTACCGAGTTGAAAGATGGTGTTGAAAATGCAAAGAAAAGGTGGCTAGGAATATGGAAAAGGGGGAGGTTGAGAAGTCATGTTGTTATACCCAAATCTTGA 1938 0.3973 MLKREQCDHTKHDSSFSHWKILIGPYDWGNCQNLPQNSGPGVYELGVGSSTSDLGREIYKLVTDPHRVLAVYIGKSDNVKKILRSYGRDGSHLGDNCSSGSLFNEIFFRGFPIVYRWAASKISNALETFDYAWNKVDNGKRRSNDILQMLNIISSNKLPMTADKLDEVEKNSSFVDESITKNDVGTSEVASEVEVNHQLAHDKSDNTENNSSFVDESITKNDVGTSEVASKVEVNHQLADDKSDETENNSSFVDESITKIDVGTSEVALEVEVEHQFANDKSDEAENNSSFVDESIIKNDVGTSEVALEIEVNHQLADDKSYEAENNSSFVDKSITKNDVGTLEVALEAEVDHQLAEASPLKKKGRSDKSEANKNKDGIVCTKPPVEKRFSCHEHKGMRINLFSAKAIRRSKFESEILAGSFVDESITKNDVGTSEVVLEAKVDHQLAEAFPLKKKGKNDKGEANKKMVECFLEVKTDRSLWNKNFDRAGFVKDHFNLYEDFEATRKSNHSNMFHDASVFCLRSVVLLEVMEEEFQAVKSNADRLKQENEDLKLRVKTLEDQLKESSNSSKTTKDVKKKDEEDKRDIEANKCVELNNNFGVIKGEVEKDVKKITELKDGVENAKKRWLGIWKRGRLRSHVVIPKS 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g00299 645 Coils Coil 268 288 - -
Mepo7g00299 645 MobiDBLite consensus disorder prediction 205 228 - -
Mepo7g00299 645 MobiDBLite consensus disorder prediction 234 249 - -
Mepo7g00299 645 PANTHER PROTEIN EFFECTOR OF TRANSCRIPTION 2-RELATED 1 590 IPR038909 GO:0003677|GO:0006355
Mepo7g00299 645 Coils Coil 528 569 - -
Mepo7g00299 645 MobiDBLite consensus disorder prediction 199 228 - -
Mepo7g00299 645 Coils Coil 578 598 - -
Mepo7g00299 645 MobiDBLite consensus disorder prediction 563 583 - -
Mepo7g00299 645 Pfam GIY-YIG domain-containing protein 16 147 - -
Mepo7g00299 645 MobiDBLite consensus disorder prediction 233 252 - -
Mepo7g00299 645 MobiDBLite consensus disorder prediction 357 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g00299 Mepo-Chr7 5551838 5554996 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g00299 1 151 HRT Transcription Factor Family AT5G56780 37.838 2.35e-29 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HRT Mepo7g00299 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g00299 - - mtr:120576127 816.609