Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g00226 ATGGAGAATGAGCAGTGGTGCAGCATATGCTCTAAAATGGTGAGTCCAATGAATGAATATGAAAACAAATGTCCATTTTGTGATACACAATTTGGTGATGCAATGGAAAATCTAAGGGACCATAATAATGATGCTATTGATTTAAGGTCAGCTTGGGTTTTCTCACTTTATGCACCAATTTTTCTTGGTTTGATGAATGCTTTTAGTCCTTCTCTAGCTACAATTTCTTCACAAGAAAGCACATCAAGAAATGATGAAGAATTCGAACAAGAGACCGGAAATTACAATGAACTTGTAATTGGAAGAAGGAGAAGAACTTCAACTTACATGATGCATCTATTTAGAGGACTTCATGTTAGAATGGTTTCAGAAAATGAAAACATAGAACAAAATAGAAACATTGATAACAATAACAATAACAATAATAGTATATTTGTTATTGATCCATTCAATGAAGGTGCATTAATTGTGAGAGGTCCTAATTTGACTCACACAAATAGGTCAAATGAAAATAATATTAATACGACTATTAGTTCTTTGAATGATTTTGTGGATGGTAGTGGATTTGATTTATTGTTGCAACATTTGGCGCAAATTAGTCCTACTGGATATGCAAGTGTGAATCCTCCAACAAAGAAGGAAGCAATTGAAGCAATGGAAAGTGTGATTAATGATGAGAAATTGCAATGTACTATATGTTTGGAGGATGTTGAGATTGGAGATATTGCTAAAGAAATGCCATGTAAGCATAAATTTCATGGTGATTGTATTGTATCATGGCTTAAGCTACATAGCTCTTGTCCAGTTTGTAGGTTTCAAATGCCTCGTGAGGAATCAAATGTTTTGGCTAATTTGGAAAATGGAAATAGAGAAAGCCAGAATAATGAGGTTGTGAGGGGTAGAAATGGAAGGAGGAATTGGTTTCCTGTGCTTCAATCTTTTAATAATTTCCTTCCTTTTCCTTGA 966 0.3395 MENEQWCSICSKMVSPMNEYENKCPFCDTQFGDAMENLRDHNNDAIDLRSAWVFSLYAPIFLGLMNAFSPSLATISSQESTSRNDEEFEQETGNYNELVIGRRRRTSTYMMHLFRGLHVRMVSENENIEQNRNIDNNNNNNNSIFVIDPFNEGALIVRGPNLTHTNRSNENNINTTISSLNDFVDGSGFDLLLQHLAQISPTGYASVNPPTKKEAIEAMESVINDEKLQCTICLEDVEIGDIAKEMPCKHKFHGDCIVSWLKLHSSCPVCRFQMPREESNVLANLENGNRESQNNEVVRGRNGRRNWFPVLQSFNNFLPFP 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g00226 321 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 118 275 - -
Mepo7g00226 321 FunFam E3 ubiquitin-protein ligase RNF181 200 277 - -
Mepo7g00226 321 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 202 277 IPR013083 -
Mepo7g00226 321 ProSiteProfiles Zinc finger RING-type profile. 230 271 IPR001841 -
Mepo7g00226 321 SMART ring_2 230 270 IPR001841 -
Mepo7g00226 321 Pfam Ring finger domain 229 271 IPR001841 -
Mepo7g00226 321 SUPERFAMILY RING/U-box 216 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g00226 Mepo-Chr7 4709647 4711025 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g00226 87 289 C3H Transcription Factor Family AT1G26800 29.756 2.47e-23 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g00226 - K11982 cam:101512035 496.893