Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g00221 ATGGATGTTTGCAACAATGTATCAGTTTCAGGAGAGTTTCAACAAGAGTTTTCCACCATTGATGACCTTTTTCCTGCTCACAACACGGAAGTGGATTTAGGGACGGAGTGGTTGTCAGTGTTTGTTGAAGAATGTTTTTCAAGCAAACCAAGTTGTGTCATAGCACCTTCTTCTAATGTTCAAATTCAAGAAAGTACAAACACAAAACCTTCAAGCACAATGCAAAAACCTCAACAACAAAATCAATCTTATTTGCAAAATTTTGTTGTTCCTGGAAAAGCAAGAAGCAAAAGAAAAAGACTTTCAGCTCCTAGTACCAAAATTTGGTCACATTCACATCTTATAAGTGATGGTAATTTGATTTCAGATCCTCCTTTATTGAAACAAGCTTATTGGTTAGCTGATAGTGAACTCATTGCTCCGAAAAACGAGCAAAAGGTCTCTGCAATTGCGTGCGGAGACCAGAAAGAAACAAAAAGAAGGGTGAAGAGAGTGGTAAAAATGGAGAAAGAGAAAGATAGTTTTGAGGTAGGAATTATTCAAGTTAAGAATAGTGAGAATGTTAATGATGATGATGAGGAACATATTCCAAATGCAAGAAGGTGCACTCATTGTTTGTCACAAAGGACCCCACAATGGAGGGCAGGACCATTGGGACCAAAAACACTATGCAATGCATGTGGTGTGAGGTACAAGTCTGGTAGGTTGTTGCCAGAGTATAGGCCAGCAAAGAGTCCTACTTTTGTTAGCTACTTGCATTCAAATTCTCACAAAAAAGTTCTTGAGATGAGAATGCAATCTATTAAGTAG 810 0.3802 MDVCNNVSVSGEFQQEFSTIDDLFPAHNTEVDLGTEWLSVFVEECFSSKPSCVIAPSSNVQIQESTNTKPSSTMQKPQQQNQSYLQNFVVPGKARSKRKRLSAPSTKIWSHSHLISDGNLISDPPLLKQAYWLADSELIAPKNEQKVSAIACGDQKETKRRVKRVVKMEKEKDSFEVGIIQVKNSENVNDDDEEHIPNARRCTHCLSQRTPQWRAGPLGPKTLCNACGVRYKSGRLLPEYRPAKSPTFVSYLHSNSHKKVLEMRMQSIK 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g00221 269 FunFam GATA transcription factor 191 269 - -
Mepo7g00221 269 ProSitePatterns GATA-type zinc finger domain. 202 227 IPR000679 GO:0006355|GO:0043565
Mepo7g00221 269 Gene3D - 193 269 IPR013088 GO:0006355|GO:0008270
Mepo7g00221 269 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 199 259 - -
Mepo7g00221 269 ProSiteProfiles GATA-type zinc finger domain profile. 196 232 IPR000679 GO:0006355|GO:0043565
Mepo7g00221 269 PANTHER GATA TRANSCRIPTION FACTOR 21 268 - -
Mepo7g00221 269 CDD ZnF_GATA 201 248 IPR000679 GO:0006355|GO:0043565
Mepo7g00221 269 SMART GATA_3 196 250 IPR000679 GO:0006355|GO:0043565
Mepo7g00221 269 Pfam GATA zinc finger 202 236 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g00221 Mepo-Chr7 4644397 4646223 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g00221 36 266 C2C2-Gata Transcription Factor Family AT4G32890 40.851 4.46e-43 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Mepo7g00221 GATA 1.8e-14 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g00221 - - pvu:PHAVU_004G079200g 317.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g02521 3 35302247 35303607 Mepo7g00221 7 4644397 4646223 PCT