Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g00203 ATGGAAATTCAATTTGATGAACCAAAGAAGAGTTTGAGACCAAAAAAGGTCAACAAATTCAAAGGGAGAAACAAAAAGAGTGAAACAACAGACAAGTTTGTTGGGGTGAGACAAAGACCATCAGGTAGATATGTTGCTGAGATAAAAGACACAACACAAAACATAAGAATGTGGCTTGGAACATTTGAAACAGCTGAGGAAGCAGCAAGAGCTTATGATGAAGCCGCGACACTTCTTCGCGGTTCCAACACTCGCACCAACTTTGTCACACATGTTTCTTACGATTCCCCTCTCGCTTCTCGGATTAGACATCTTCTCAACAACCGAAAAAAAGGTACCAAACAACAAGAAGATATAGATGGTATAAGCAGCACCACTAGCCGTGCTGACACGATTAATGGTACTACTAGCGATGGTAGTACTAGTAGCACCACTAACTGTATTGGCACAGCCAGTGGTGCTATTAATAGTACTAGTGCTAGCGGTGTGACTAACACTAGTACCGTTATTAGTACTAATTCGAGCAATACCAACGTCGACGATAAAAGTGAAAGCTCGCTTTCTAGTTTGACAACGATACAAAAACCAAAATTATCTGATGATGCATATAGGCCAGATATGAGCAATTTAACAAATGAATATGAGTTAAATTCCTATAAGTCCAATGTTTCATGGGATTTTGGACCTATTTTTGATAATTTTCCTTTTGATCAATGGTTGGATATGACAAACAATGATGGATTATTGTGTGATATGGTTGATAAAGGAGTTTCAGAATTTGAAAGGATGAAAGTTGAAAGACAAATATCAGCTTCACTTTATGCAATTAATGGTGTTCAAGAGTACATGAAAAATGTTCAGGATTGCAATGAAACTCAATGGAATCTTTCACCCTTGTGCTAA 903 0.3776 MEIQFDEPKKSLRPKKVNKFKGRNKKSETTDKFVGVRQRPSGRYVAEIKDTTQNIRMWLGTFETAEEAARAYDEAATLLRGSNTRTNFVTHVSYDSPLASRIRHLLNNRKKGTKQQEDIDGISSTTSRADTINGTTSDGSTSSTTNCIGTASGAINSTSASGVTNTSTVISTNSSNTNVDDKSESSLSSLTTIQKPKLSDDAYRPDMSNLTNEYELNSYKSNVSWDFGPIFDNFPFDQWLDMTNNDGLLCDMVDKGVSEFERMKVERQISASLYAINGVQEYMKNVQDCNETQWNLSPLC 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g00203 300 PRINTS Ethylene responsive element binding protein signature 55 71 IPR001471 GO:0003700|GO:0006355
Mepo7g00203 300 PRINTS Ethylene responsive element binding protein signature 33 44 IPR001471 GO:0003700|GO:0006355
Mepo7g00203 300 MobiDBLite consensus disorder prediction 110 144 - -
Mepo7g00203 300 Pfam AP2 domain 32 81 IPR001471 GO:0003700|GO:0006355
Mepo7g00203 300 MobiDBLite consensus disorder prediction 118 144 - -
Mepo7g00203 300 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 31 269 - -
Mepo7g00203 300 Gene3D AP2/ERF domain 31 91 IPR036955 GO:0003700|GO:0006355
Mepo7g00203 300 SUPERFAMILY DNA-binding domain 32 89 IPR016177 GO:0003677
Mepo7g00203 300 MobiDBLite consensus disorder prediction 158 188 - -
Mepo7g00203 300 ProSiteProfiles AP2/ERF domain profile. 32 89 IPR001471 GO:0003700|GO:0006355
Mepo7g00203 300 FunFam ethylene-responsive transcription factor RAP2-11 31 90 - -
Mepo7g00203 300 MobiDBLite consensus disorder prediction 1 28 - -
Mepo7g00203 300 SMART rav1_2 32 96 IPR001471 GO:0003700|GO:0006355
Mepo7g00203 300 CDD AP2 32 88 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g00203 Mepo-Chr7 4424475 4425377 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g00203 14 107 AP2-EREBP Transcription Factor Family AT5G19790 69.149 7.52e-37 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo7g00203 AP2 3.7e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g00203 K09286 - gmx:100782886 290.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g02544 3 35483543 35484330 Mepo7g00203 7 4424475 4425377 PCT