Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g00172 ATGGCTGAGTCACAAGGTGGTGATGGAAGTAGTTCGGGAAACAGGCGCAATAAAAGCGCAAATGCTGCTGCAAAGCGTGCAATAGCAAGAGCAACACAAGATGAACCAGTTATATCGCCGTGTGGTGCTTGCAAGTTCTTGAGGAGGAAGTGTAGTAGTGGATGCATCTTTGCACCCTACTTTGGTACTGACCAAGGTGCGGCTAAGTTTGCGGCTGTGCACAAGGTGTTTGGTGCTAGCAATGTGTCGAAGCACTTGTCCAACATTCCGGCTAGCCATCGCAATGAAGCTGCTGCAACAATTTCCTATGAGGCTCAAGCTAGGCTAGCTGATCCGGTTTATGGCTGTGTGTCCACCCTTCTTGCTTTGCAGCAACAGGTGGCAGCTATGCAAGCAGAGGTCTCGATGATGCAAACTCAGTTGATGAATAGGAGGCTTGCATATGCAAATGCAAGTACTCTTCAAACCCCATATCAGCCGCCGTTTCAATTGGTACAGCAACCAAACTTCAACCTACCTGTGCAGCCAGCATATTCCAACAACTCATCTGCTTCCACCACCAACCTTATGAACATGAACAACTTCAACCCTGGTTTTGGCCTCACAATGGAGACAGCACCTTCATCTCAGAGCTTAGAGCCTTTTCAAAACTCCAGGATGTCTCGTTTTGAGAAAGATGATTAA 684 0.4766 MAESQGGDGSSSGNRRNKSANAAAKRAIARATQDEPVISPCGACKFLRRKCSSGCIFAPYFGTDQGAAKFAAVHKVFGASNVSKHLSNIPASHRNEAAATISYEAQARLADPVYGCVSTLLALQQQVAAMQAEVSMMQTQLMNRRLAYANASTLQTPYQPPFQLVQQPNFNLPVQPAYSNNSSASTTNLMNMNNFNPGFGLTMETAPSSQSLEPFQNSRMSRFEKDD 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g00172 227 MobiDBLite consensus disorder prediction 1 26 - -
Mepo7g00172 227 ProSiteProfiles LOB domain profile. 39 141 IPR004883 -
Mepo7g00172 227 PANTHER LOB DOMAIN CONTAINING PROTEIN 32 205 - -
Mepo7g00172 227 Coils Coil 120 140 - -
Mepo7g00172 227 MobiDBLite consensus disorder prediction 200 227 - -
Mepo7g00172 227 Pfam Lateral organ boundaries (LOB) domain 40 138 IPR004883 -
Mepo7g00172 227 MobiDBLite consensus disorder prediction 200 218 - -
Mepo7g00172 227 MobiDBLite consensus disorder prediction 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g00172 Mepo-Chr7 4004108 4005535 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g00172 39 187 AS2 family AT3G03760 68.456 1.90e-63 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mepo7g00172 LOB 3.5e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g00172 - - aprc:113866578 252.677