Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g00170 ATGAAGATTCCCAGAAAATCGAGTAGTAGCAATGGTGATTCAAACTCTTCATCATCATCATCACCGTTTCTTGTTCAACACGCAAGCCTAATTCTACCATACCTAACCCACACACAACTCGCCAACATCTCCCTAACCTGCAAATCACTCCGTAAACTCACTCAAATCATCACTCTCCGTCGCATCTCCGACGCTTCTCGAACGTTTGAGAATCATCCGATCCCATTTCTCAACACCATCAACAACAACAACCCTCCTTACTCCTACTTTCTCTACACACCTTCCCTCATTCTCTCTCACAACACCCCCAATTATCAACCATGGGGTGCTGGAGAGGGTAATTCTGTCATTTCAGATGATGGGTCGGTGAGATTTGGTGTTGGTTCTGATTTTGAAGGTGTTTGTGAAAATGGGTCAGTGGGAGGTGGTGGAGGTAGTTCTGTCATTTCACTACGACCACCACCATCCATTGATGATGATGGATCAATGAGTTTTGGTGTTGGATGTGAAGGTGTTTGTGATGATGGTGGGGGTAAATCAGTAATTTCACTAATTCCGCTGGTTGATGGTGTTGGGCCGGTGAATTTTGGTGTTGGAGGTAATTTTCAAGGTGTATGTGATGATGGGTCTGTGGGAGATGGTGGGGGTAGTTCAGTGATTTCACCAATTCCGCCTAAAACGGTTGATGATGATGGGTCAGTGAGATTTGGTGTTGGTTGTGAAAATGGGAAGGCGGGAGGTGGTGGAAGTAGTTCAGTTATTTCACCAATGCTGCCTAGAACGGTTGACGATGATGAGTCGGTGAGTTTTGGTGTGGGATGTGAGTGTGAAGGTGTTTGTGATGATGGGTGTATGTGTTATTTTGATGATGGGGTTGATGGTATTGGAAGAGAGTGTGGGTTGGGTTGTTTATGTGGGAGGGAGTGTGAGAATAGGGTGAGTCAAAATGGGGTTAATGTTAGGGTTAAGATTGTTTGGTGTGGTGGTGGGAAAGGGTGGGGTTTGTTTGCGAATCAGGTTGTGCGTAAATCGGAGTTTTTGTTTCAATATGCAGGTGAACTACTGACAACCACGGAAGCACAGAAGAGACAACAACATTATGATGAACTGGCATCGCATGGTCGTTTCTCGTCTGCTCTTTTAGTAGTAAGGGAACATCTTCCATCAGGAAAGGCATGTTTGAGATTGAACATAGACGCAACAAGAATAGGAAATGTTGCCCGGTTTGTAAATCATTCATGTGATGGTGGTAATTTAAGCACAAAGCTAGTCAGAAGTACAGGAGCTTTGTTCCCCCGCCTTTGCTTTTTTGCTTCAAAAGATATCCAAAAAGATGAAGAGATTACTTTTAGCTATGGAGAAATCAGGAAAATGTCCAATGGGCGGCCGTGTCACTGCAACAGCCCTTCTTGCCTTGGAACATTGCCCTCAGAAGACACTTGA 1443 0.4463 MKIPRKSSSSNGDSNSSSSSSPFLVQHASLILPYLTHTQLANISLTCKSLRKLTQIITLRRISDASRTFENHPIPFLNTINNNNPPYSYFLYTPSLILSHNTPNYQPWGAGEGNSVISDDGSVRFGVGSDFEGVCENGSVGGGGGSSVISLRPPPSIDDDGSMSFGVGCEGVCDDGGGKSVISLIPLVDGVGPVNFGVGGNFQGVCDDGSVGDGGGSSVISPIPPKTVDDDGSVRFGVGCENGKAGGGGSSSVISPMLPRTVDDDESVSFGVGCECEGVCDDGCMCYFDDGVDGIGRECGLGCLCGRECENRVSQNGVNVRVKIVWCGGGKGWGLFANQVVRKSEFLFQYAGELLTTTEAQKRQQHYDELASHGRFSSALLVVREHLPSGKACLRLNIDATRIGNVARFVNHSCDGGNLSTKLVRSTGALFPRLCFFASKDIQKDEEITFSYGEIRKMSNGRPCHCNSPSCLGTLPSEDT 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g00170 480 MobiDBLite consensus disorder prediction 1 21 - -
Mepo7g00170 480 ProSiteProfiles SET domain profile. 320 453 IPR001214 GO:0005515
Mepo7g00170 480 Gene3D SET domain 250 480 IPR046341 -
Mepo7g00170 480 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUV39H 65 475 - -
Mepo7g00170 480 SUPERFAMILY SET domain 267 473 IPR046341 -
Mepo7g00170 480 SMART set_7 320 459 IPR001214 GO:0005515
Mepo7g00170 480 Pfam SET domain 332 453 IPR001214 GO:0005515
Mepo7g00170 480 ProSiteProfiles Post-SET domain profile. 460 476 IPR003616 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g00170 Mepo-Chr7 3996226 3999696 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g00170 298 475 C2H2 Transcription Factor Family AT2G23740 35.676 3.61e-22 98.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mepo7g00170 SET 2.1e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g00170 K11433 - gmx:100786871 309.686