Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g00166 ATGAGTCGTTATGCTACAGAAAATATTAGAAATCTATGTCGCAACCTTGGAATGGATGATTATAGTATAGCTGATGCAGCTGTGAAATTTATATATGAAGATAGACTAGAGAAAAACTTTACCAAGGGACGTAGATCTGAACTTGTACAAGCTGCTTGTCTTTATCTTGCATTCCGGGATAACGATAAGCCATACCTTCTTATTGATTTTTCAAATTGTTTAAGGACAAATGTTTATGCGCTTGGCTCAGTTTTTTTGCAGCTTTTGAAAGTGTTAAGGCTCGAAGAACACGCGATTGTTCGAAAGCTTGTTGATCCCAGTCTTTTTATTTACAAATTTACGCATACTTTGTTAAAGCAAAGGAATATGGCTGTCTCCGAAACTGCGCTGAATATTCTTTCCGACATGAAACGTAACTGGATGCAGACAGGGAGGAAGCCTAGCGGATTATGCGGTGCAGCGTTATACATGGCTGCTCTTGCAAATGGTTTTCCGTGCACGAAATCAGATGTTCTAAGAGTCGTCCATGTATGTGAAGCAACATTGACCAAGCGGCTGATAGAGTATGAGAACACAGAGTCTTCCAGCTTGACAATTGACGAGTTGAATGCAATGGCAAAAGAGCATGAAAACCGTCCAATTAAATTTGATAAACTCTCTGGTGGACTTGGTGGTGGTTTGGATCCTCCTGCATTCCAGCGTGCTGAGAAGGATAGAATGGTAAAGTCACATACTGAGGAGAATGCTAATAAATCAGATGATTTGGCAATGGATTCAAATGATGCATACGAGAGCCAAATAGAGTTACATACCTCTGAGCCTGGAAATATTGGGGGAGAGTATGTGGCCAATAAAGATGGTGAGCATGACGAGTCACGTATAGAAGATGATATGAATGAAAAAACTCATGATGAATCAGAAAGTCTCTCTGATATTGATGATAAGGAGGTTGATGGCTACCTTCACAACGAGGAGGAAACACGTTACAAGAAGCAGATATGGGAATTTAATAATCGAGAGTATCTTGAGATTTTAGCTTGTGTGGAAGTTCAATGTGGACTAGGTCTTATTCTTCCTTCGATTCTTTTACAGGAACAAGCTGTCAAGGAAGCAGCTGCAGCAGCTGAAAGGAGAAGATTAGAGGAGGAATTAAAAAATTGTACCCCTGAAGAGCGTGAAGCAAGAGAACTTAGGGGAGCTGTTGCTGCAGATGTGGCAAAATCCAGAAAGGAAAAGAGGAAACAACGAGCTGAAGAGGAAAGAAGGTTGGGTCCTGCTCAATCTGCTGTAGAGGCAACTAGCCGAATGTTGAAAACAAAGGCAGCTCCAGAGAATAACAAGAAAGTACGATTTGAAACAAAGGAGGATGAATTGGAACCAGTCAACGAATTTGCGGCTGATGAAGATATGTATGCAGAATATGATGATACTATGTATCCAGAAAATGACTATGAGACATATGACTACGAGGAAGCCGGTGGTTTTTATGAATATTGA 1497 0.4055 MSRYATENIRNLCRNLGMDDYSIADAAVKFIYEDRLEKNFTKGRRSELVQAACLYLAFRDNDKPYLLIDFSNCLRTNVYALGSVFLQLLKVLRLEEHAIVRKLVDPSLFIYKFTHTLLKQRNMAVSETALNILSDMKRNWMQTGRKPSGLCGAALYMAALANGFPCTKSDVLRVVHVCEATLTKRLIEYENTESSSLTIDELNAMAKEHENRPIKFDKLSGGLGGGLDPPAFQRAEKDRMVKSHTEENANKSDDLAMDSNDAYESQIELHTSEPGNIGGEYVANKDGEHDESRIEDDMNEKTHDESESLSDIDDKEVDGYLHNEEETRYKKQIWEFNNREYLEILACVEVQCGLGLILPSILLQEQAVKEAAAAAERRRLEEELKNCTPEEREARELRGAVAADVAKSRKEKRKQRAEEERRLGPAQSAVEATSRMLKTKAAPENNKKVRFETKEDELEPVNEFAADEDMYAEYDDTMYPENDYETYDYEEAGGFYEY 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g00166 498 Gene3D - 2 97 - -
Mepo7g00166 498 MobiDBLite consensus disorder prediction 402 425 - -
Mepo7g00166 498 Coils Coil 363 383 - -
Mepo7g00166 498 CDD CYCLIN_TFIIIB90_rpt2 102 192 - -
Mepo7g00166 498 Gene3D Single helix bin 301 346 - -
Mepo7g00166 498 MobiDBLite consensus disorder prediction 283 310 - -
Mepo7g00166 498 MobiDBLite consensus disorder prediction 232 257 - -
Mepo7g00166 498 SUPERFAMILY Cyclin-like 6 95 IPR036915 -
Mepo7g00166 498 MobiDBLite consensus disorder prediction 272 310 - -
Mepo7g00166 498 SUPERFAMILY Cyclin-like 103 193 IPR036915 -
Mepo7g00166 498 MobiDBLite consensus disorder prediction 402 473 - -
Mepo7g00166 498 FunFam Transcription factor IIIB subunit 105 194 - -
Mepo7g00166 498 MobiDBLite consensus disorder prediction 441 460 - -
Mepo7g00166 498 MobiDBLite consensus disorder prediction 216 257 - -
Mepo7g00166 498 Pfam Brf1-like TBP-binding domain 310 445 IPR011665 -
Mepo7g00166 498 PANTHER TRANSCRIPTION INITIATION FACTOR IIB-RELATED 4 442 IPR000812 GO:0006352|GO:0070897
Mepo7g00166 498 SMART cyclin_7 108 191 IPR013763 -
Mepo7g00166 498 SMART cyclin_7 7 90 IPR013763 -
Mepo7g00166 498 Pfam Transcription factor TFIIB repeat 5 90 IPR013150 GO:0017025
Mepo7g00166 498 Pfam Transcription factor TFIIB repeat 101 191 IPR013150 GO:0017025
Mepo7g00166 498 Gene3D - 105 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g00166 Mepo-Chr7 3955704 3966492 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g00166 5 440 Inorganic Solute Cotransporters AT2G01280 40.466 8.61e-77 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g00166 K15196 - gmx:100817609 401.749