Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g00159 ATGAATGGTGAAGGTGACATGTGTGTTAAAGATTTTAGTATCATGCTCTTTGGAAAGAAGATTGAGGCCAACTCTTCAACCATGAATTCTTGCAGTAACTCAAAGCATAAAGGAAATGATATGCCTCATACTCAAAACATTGAGAAATCAAAGAATTCCTCTAATGATCAAAATGAATCAAAAGTTGTTAATACAAGCACTGTGGAAGATAATATTGAAACTAGCAGCACAGATCAAGACAAAGTCCTCAAAAAACCTGACAAGATTGTTCAATGTCCAAGATGCAACAGTTTCGACACGAAATTTTGTTATTTCAATAACTATAACGTCAGTCAACCTCGGCATTTTTGTCGGAAATGTCATAGATATTGGACTGCCGGTGGAACAATGAGAAACGTTCCTTTCGGTGCAGGGAGACGGAGGAACAAGCAGATAGCTTCTCAATATCGCCACATGATTGTAGCTTCCGGTGGAATTTCAACCTCAAATTTAGAAAGCAACGACTCTTCTAGGTACCAAAATGTCTCAACTACTGAATCTGCCGCAGTTTTCAGGTGTTCAAATAATAATGGTATTGTCCTAAACTTTGGTCCGGAAAATGAATCTCTCCGTGAATCTAGCAATTCGATGTTTAGTCCTAGAAATCACAAGAGAAATATTGATGCAAGTGCAAACAATTGTAGAGAAAATGGAGATGAAGAATCTTCATTATGTGTATCTTCTGTGACAAACGGTTATACTCGAGGGAACGAGTTATCTGAATCCGAACATAATAGGTCAAAACCAGTGCAGAGTTACCCTGCATCTTCATGGATGATTCCATTGAATCAAAGCTTGAACAATGTTCCTTCCATGGTTCAATCTTCAATGCAAATGTGTAACCCTTATGATCCTAGTTCAATGCAGTGGTGTCACATGCCGAACATTGGCTTGCAATTTGTTCCTGAATCATTTAGGAATGGATCAGTTTCAATAGGTTCAAATAATTGTATTTCGCCTTCTTCATCTACTACTAGCTAG 1020 0.3784 MNGEGDMCVKDFSIMLFGKKIEANSSTMNSCSNSKHKGNDMPHTQNIEKSKNSSNDQNESKVVNTSTVEDNIETSSTDQDKVLKKPDKIVQCPRCNSFDTKFCYFNNYNVSQPRHFCRKCHRYWTAGGTMRNVPFGAGRRRNKQIASQYRHMIVASGGISTSNLESNDSSRYQNVSTTESAAVFRCSNNNGIVLNFGPENESLRESSNSMFSPRNHKRNIDASANNCRENGDEESSLCVSSVTNGYTRGNELSESEHNRSKPVQSYPASSWMIPLNQSLNNVPSMVQSSMQMCNPYDPSSMQWCHMPNIGLQFVPESFRNGSVSIGSNNCISPSSSTTS 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g00159 339 MobiDBLite consensus disorder prediction 28 73 - -
Mepo7g00159 339 Pfam Dof domain, zinc finger 87 144 IPR003851 GO:0003677|GO:0006355
Mepo7g00159 339 ProSiteProfiles Zinc finger Dof-type profile. 90 144 IPR003851 GO:0003677|GO:0006355
Mepo7g00159 339 ProSitePatterns Zinc finger Dof-type signature. 92 128 IPR003851 GO:0003677|GO:0006355
Mepo7g00159 339 PANTHER CYCLIC DOF FACTOR 2 11 289 IPR045174 GO:0003700|GO:0006355
Mepo7g00159 339 MobiDBLite consensus disorder prediction 28 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g00159 Mepo-Chr7 3813177 3815132 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g00159 45 157 C2C2-Dof Transcription Factor Family AT3G47500 56.637 2.26e-39 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mepo7g00159 zf-Dof 1e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g00159 - - mtr:25495811 614.764