Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g00148 ATGGGAAGTAGAAAGGAAGAAGAGAAGATTGAGAAAATTATTAGGGGGCTTATGAAGCTTCCGCCGAATCGAAGATGTATCAACTGTAATAGTTTGGGACCTCAGTATGTATGTACAACTTTTTGGACCTTCGTTTGTATCACTTGCAGTGGAATACATCGTGAGTTTACTCATCGTGTGAAGTCAGTTTCAATGGCCAAGTTCAATTTTCAAGAAGTTGATGCTCTTCAAAATGGTGGTAACCAGCGTGCAAGGGATTTATATTTGAAAGATTGGGACTTCCAAAGACAACGATTGCCAGATAGCAGCAATGTCAACAAAGTAAGGGAGTTCATAAGGAATGTATATGTGGATAAAAGATATGCTGGAACAAAGTCATCTGAAAAGCCTCCAAGAGATGCACAGAGCCTCACAATTAATGAAGACGAGGTTAGGCGTGCCAGTTCTTATCATTCATATTCACAAAGTCCTCCATATGATAATCAGTATGAGGATCGACGATATGGAACGCAAGCAGGGGCTCTGACAAGAAAGCCTGGTTCAGATAAGGTCCGTTATGAAGGGAAGATGGCTAGTATCATTTTTAGTCCTGGTCGTTTAAGTGATCACTCGTATGATGAGAGATTTGCTAATGAGGGATCTGGTCCAAGAAATTCCGACTTTTCTGTGTCTAGTGGTCGTGAGCAATTCAAGCCTGATGTTCAGTCTCCTAAGTTTGGGTTTAACAGTCCATCTTATAAGCGTCCTGGTTCTAGTTCAAGTGAAGATGTGTGGACTCAAGCAAAAATTGCAGCTCTCGAATCTAATGCCGCTGCCAAGAGAGATGCAGATGGAATTCATCGTCCGCAGAGAACTACATCATTGCAACCAACAGACAACAACCTTTCAACCTTAAGATCTTACAATTCTGGTGGTGCAGTTGATTTTTTCTCAGAAGCTTTCCAATCTTCAGGGTCCCTTCAAGATAAAGCATTAGGAAATTCACTGCCATCTGGTCCTGCTAGATCGGTTAGCTTGGACCTTTCCAAGGCACCAGCGGCATCGGCCTCATCTGTTGACCTTTTTCAAACGGTTGCACCATCTCAATCTGCATTAGGAGATCTGTTTCAACTATCTGATAAGGAAGCAGTTCCATCTTTCAAGGGAAGTCAACCTACGCAAACATCCCAAGTCGCATCTATTGATTTCTTTGCGGATCTTCCTCAGAAGCCTTCTGCTGCAACCTCAGATGCAAAATCAGTGGAGTTATCCATTCCTAAAAATGAAGGTTGGGCAACATTTGATACGCCTCAGTTCACATCATCTACTACACAAGTGGAAATTCCTGCAGCAGTACCTTCTAGTGCTGAATCTTTGCAGGCTAGGTTTGATCCATTTTCTACTGCACAAGTGGAAATTCCTGCGGCAGTACCTTCAAGTGCTGAGTCTTTACAGGATAGGTTTGATCCATTTTCAACCTTAAATGGAAATTTCCAAATGCCATCTTTTGAAATTCCTAGTGTCGGTGTACCTTCATCTGTTACATCTAATGTATGGCATGATGGTGTATGGAATGGAGAAAAACAAGTTCCTGTTATGGCAACAGACACTCAACCATGGAATGCATTTGAAGATTCTGGCACTCATCTTTCAGTGGATGGCAATAATCAAGGATTACAATCGCATAATTTCCCATCAGAAAGTTTTGGTTTAAGTGCTTCTGAGGTACCTATTGAAGATGGAATTCAAGGTGTTGCTCCTATTGGAGGATTTGATAATCATGAATTCCCATCAAATGGAGATATTCAATCTAATGGAATCAATCGTAAATCAACTAATCCATTTGATTTTCCCTTTGATTCTGATGTAGAACAGAACAATATGTTCCTTGATATGAACTCTTTGCAAGCTGCTCTGCCAGATGCCCTTTTGCCAGCCACATTTGGTGGTATCCCTGAACCTTGGCTCCCTCAAAATACAGTGACCCCATATATTTCATCTGCAGGAGAAGGTGGTTTCTCATTCATGGCCGTGCACACACCAAGTTCTCAATTACAGAACATCCAAGCACAGGAACCAGTTGCGTCGTTTGGCGGAAATCCTTTTGCATAG 2091 0.418 MGSRKEEEKIEKIIRGLMKLPPNRRCINCNSLGPQYVCTTFWTFVCITCSGIHREFTHRVKSVSMAKFNFQEVDALQNGGNQRARDLYLKDWDFQRQRLPDSSNVNKVREFIRNVYVDKRYAGTKSSEKPPRDAQSLTINEDEVRRASSYHSYSQSPPYDNQYEDRRYGTQAGALTRKPGSDKVRYEGKMASIIFSPGRLSDHSYDERFANEGSGPRNSDFSVSSGREQFKPDVQSPKFGFNSPSYKRPGSSSSEDVWTQAKIAALESNAAAKRDADGIHRPQRTTSLQPTDNNLSTLRSYNSGGAVDFFSEAFQSSGSLQDKALGNSLPSGPARSVSLDLSKAPAASASSVDLFQTVAPSQSALGDLFQLSDKEAVPSFKGSQPTQTSQVASIDFFADLPQKPSAATSDAKSVELSIPKNEGWATFDTPQFTSSTTQVEIPAAVPSSAESLQARFDPFSTAQVEIPAAVPSSAESLQDRFDPFSTLNGNFQMPSFEIPSVGVPSSVTSNVWHDGVWNGEKQVPVMATDTQPWNAFEDSGTHLSVDGNNQGLQSHNFPSESFGLSASEVPIEDGIQGVAPIGGFDNHEFPSNGDIQSNGINRKSTNPFDFPFDSDVEQNNMFLDMNSLQAALPDALLPATFGGIPEPWLPQNTVTPYISSAGEGGFSFMAVHTPSSQLQNIQAQEPVASFGGNPFA 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g00148 696 MobiDBLite consensus disorder prediction 215 254 - -
Mepo7g00148 696 Gene3D Arf GTPase activating protein 2 132 IPR038508 -
Mepo7g00148 696 ProSiteProfiles ARF GTPase-activating proteins domain profile. 11 129 IPR001164 GO:0005096
Mepo7g00148 696 SMART arf_gap_3 11 129 IPR001164 GO:0005096
Mepo7g00148 696 PANTHER ARFGAP/RECO-RELATED 1 696 IPR044820 GO:0005096
Mepo7g00148 696 CDD ArfGap_AGFG 15 121 - -
Mepo7g00148 696 Pfam Putative GTPase activating protein for Arf 12 122 IPR001164 GO:0005096
Mepo7g00148 696 PRINTS HIV Rev interacting protein signature 42 59 IPR001164 GO:0005096
Mepo7g00148 696 PRINTS HIV Rev interacting protein signature 23 42 IPR001164 GO:0005096
Mepo7g00148 696 PRINTS HIV Rev interacting protein signature 60 81 IPR001164 GO:0005096
Mepo7g00148 696 MobiDBLite consensus disorder prediction 205 254 - -
Mepo7g00148 696 MobiDBLite consensus disorder prediction 273 295 - -
Mepo7g00148 696 MobiDBLite consensus disorder prediction 122 165 - -
Mepo7g00148 696 FunFam Arf-GAP domain and FG repeat-containing protein 1 1 134 - -
Mepo7g00148 696 SUPERFAMILY ArfGap/RecO-like zinc finger 10 122 IPR037278 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g00148 Mepo-Chr7 3593040 3603483 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g00148 14 88 C2H2 Transcription Factor Family AT4G05330 35.443 4.14e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g00148 K15044 - gmx:100788316 972.23