Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g00097 ATGTGCGGTGGACCGGAAAAATCAAAATCTCTTTCAACTTCATCCTTTCCGCCTTCATCTGTTAGTACGGATGATTCTTTGTCCAGTTTACTTGAACATGCTTCTAAGAATGATTTTGAACAATTTAAGGTAGTTTTAGATAGTGATGCCTCACTGTTACATGAAGTCGGCGCCTGGTGTGTCCGTCAAAATGGACATAACCAAATTGTTCTTGAGGACAGAACTGCTTTAATGGTGGCAGCATCCTGTGGGAGTATTGATATTCTAAAGCTTATACTTTCAAATTCGGAGGCTGGTGTAAATTTTTCTTGTGGGACTGATAAAACCACTGCTCTTCACTGTGCTGCTTCGAGTGGTTCGGTTAATGCAGTTGATGCGGTAAAACTGCTTATATCAGCTGGCGCTGACATCAATTGTGTGGATACTAATGGGAACCGTCCAGTGGATGTTATTGTTCTTCCTATTGTTGTTCCCCATAAGCTCGAAGTCGTCAAAAGATGTCTTGAACAACTTCTCTCAAATAGTGCTGCTAATGAGTCTGTTGATGATGGTTCGCTTCCGCTGTCATCTTGTGAAAAGGGGTCTCCATCCTCTCCTGTGGCTGCAAACTTGACCGATACAGCTGTTAGTTCTACACCAGAAAAGAAAAAGTATCCAGTTGATCCATCAATTCCTGATATAAGAAACAGAATATATGCTACAGATGAATTTCGCATGTATTCGGTCAAGGTCCTTCTTTGTCATCGTGCATACACTCATGATTGGACCGAGTGTCCTTTTTACCATCCTAATGAGAATGCCCGAAGGAGAGACCCTAGAAAGTTCACCTACAGCTGTGTGCCATGCCCTGATTTTAAAAATAGGAATTGCAGACGCGGGGATATGTGTGAATATGCTCATGGAGTATTCGAGACATGGCTACATCCAGATCAGTATCGCACAAGGCTCTGCAAAGAGGGTACTAGTTGTAACCGAAAAGTGTGCTTTTTTGCACATGTTGCTGAAGAGCTGCGTCCATCGCAGGCTTCCATTAGATCAGCTGCATCTGCTCCTATTGTCATGGACATGGCTGCTGCAACGAGCCTTTATCGTGGTTCACTATCAGCAATCTCTTCGATGTATACATCACCTTTGGCACAGCCTTTGTCTTCATATGCAAATGGCCTCTTTGATGGTCAGCTGCACATGCTAAATGACTTGAGCTGTTTCTCACAGTCCCATTCTGATGCCATTTCAGTGAATCGGTCTGTTAACTCCTGTCCTAAGTGGGGCTCCCATACTGGAAAATCTGATTGGTCTGTTAGCGGAAATGACTTTGGTCGATCGCAAATATATACTTCTTTTCAGCATGGAAACAATGGTGAAGAGCCTGATATATCTTGGGTTCAATCTCTTCTCAACTAA 1404 0.4309 MCGGPEKSKSLSTSSFPPSSVSTDDSLSSLLEHASKNDFEQFKVVLDSDASLLHEVGAWCVRQNGHNQIVLEDRTALMVAASCGSIDILKLILSNSEAGVNFSCGTDKTTALHCAASSGSVNAVDAVKLLISAGADINCVDTNGNRPVDVIVLPIVVPHKLEVVKRCLEQLLSNSAANESVDDGSLPLSSCEKGSPSSPVAANLTDTAVSSTPEKKKYPVDPSIPDIRNRIYATDEFRMYSVKVLLCHRAYTHDWTECPFYHPNENARRRDPRKFTYSCVPCPDFKNRNCRRGDMCEYAHGVFETWLHPDQYRTRLCKEGTSCNRKVCFFAHVAEELRPSQASIRSAASAPIVMDMAAATSLYRGSLSAISSMYTSPLAQPLSSYANGLFDGQLHMLNDLSCFSQSHSDAISVNRSVNSCPKWGSHTGKSDWSVSGNDFGRSQIYTSFQHGNNGEEPDISWVQSLLN 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g00097 467 SUPERFAMILY Ankyrin repeat 28 182 IPR036770 -
Mepo7g00097 467 PANTHER UNKEMPT FAMILY MEMBER 32 466 IPR045234 -
Mepo7g00097 467 ProSiteProfiles Ankyrin repeat profile. 107 142 IPR002110 GO:0005515
Mepo7g00097 467 ProSiteProfiles Ankyrin repeat region circular profile. 107 141 - -
Mepo7g00097 467 Pfam Ankyrin repeats (3 copies) 64 141 IPR002110 GO:0005515
Mepo7g00097 467 Gene3D - 8 195 IPR036770 -
Mepo7g00097 467 Gene3D - 278 339 - -
Mepo7g00097 467 SMART c3hfinal6 276 302 IPR000571 GO:0046872
Mepo7g00097 467 SMART c3hfinal6 311 334 IPR000571 GO:0046872
Mepo7g00097 467 MobiDBLite consensus disorder prediction 179 212 - -
Mepo7g00097 467 MobiDBLite consensus disorder prediction 1 21 - -
Mepo7g00097 467 MobiDBLite consensus disorder prediction 7 21 - -
Mepo7g00097 467 ProSiteProfiles Zinc finger C3H1-type profile. 276 303 IPR000571 GO:0046872
Mepo7g00097 467 SMART ANK_2a 107 139 IPR002110 GO:0005515
Mepo7g00097 467 SMART ANK_2a 72 102 IPR002110 GO:0005515
Mepo7g00097 467 MobiDBLite consensus disorder prediction 179 220 - -
Mepo7g00097 467 PRINTS Ankyrin repeat signature 108 123 IPR002110 GO:0005515
Mepo7g00097 467 PRINTS Ankyrin repeat signature 126 140 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g00097 Mepo-Chr7 2471955 2473358 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g00097 24 379 C2H2 Transcription Factor Family AT5G12850 51.175 7.67e-123 372
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mepo7g00097 Ank_2 7.9e-12 CL0465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g00097 - - mtr:25490414 802.357