Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g00051 ATGATGGTGAGACCACCTTGCTGTGAGAAAATTGGGGTTAAGAAAGGACCTTGGACTCCAGAGGAGGATATAATTTTGGTATCATACATTCAAGAACATGGACCTGGAAATTGGAGATCAGTTCCCACCACTACAGGATTGATGAGATGCAGTAAAAGTTGCAGACTTAGATGGACTAATTATCTTAGACCAGGTATCAAAAGAGGTAATTTCACAGATCATGAAGAAAAAATGATAATTCACCTTCAAGCACTTTTAGGAAATAGATGGGCTGCCATAGCTTCCTATCTTCCAGAAAGAACAGACAATGACATCAAAAACTATTGGAATACACATTTGAGGAAAAAGCTTAAGAAGATTAATCAAATAGGTGATAATAATGAAATAGAAGAAAACTCTACTCCTCAGGTAAAAGGTCAATGGGAGAGAAGACTTCAAACAGATATTCATATGGCAAAACAAGCTTTGTGGGAGGCACTTTCTCTTGACAAGCCAACACCTATTTTAGCTGAAAATCAAACATCCCCTTATGCATCAAACACTGAAAACATAGCTAGATTACTCGAAAAATGGATGAAAAAACCCGAAAATTTGGATGAGATAACAATTTCAGGAAACTCCTTTATGGTAGTACCAGGATCCAGTTCTAGTGAAGCATGCAAACGAAAAGATCAAGCATTTGATTCTTTGTTGAGTTTTAATTCCTTAAATTCTGATTTTTCTCAATCTGTGTCGGTTGAAGAAAAAAGTTACTTGGCAATGGATTCTTGCTTCTTTCAATATGAAAGTAAGCCAAACCAGGAAACTCAAGTGCCTCTCATGTTTATGGAGAATTGGCCTTTTGATGATGAGACTGCTCAGTTCAATGAAGATCTAATGAACGTTCCATTGGAGGAAAATAAAGCAGGGTTGTTTTAG 918 0.3671 MMVRPPCCEKIGVKKGPWTPEEDIILVSYIQEHGPGNWRSVPTTTGLMRCSKSCRLRWTNYLRPGIKRGNFTDHEEKMIIHLQALLGNRWAAIASYLPERTDNDIKNYWNTHLRKKLKKINQIGDNNEIEENSTPQVKGQWERRLQTDIHMAKQALWEALSLDKPTPILAENQTSPYASNTENIARLLEKWMKKPENLDEITISGNSFMVVPGSSSSEACKRKDQAFDSLLSFNSLNSDFSQSVSVEEKSYLAMDSCFFQYESKPNQETQVPLMFMENWPFDDETAQFNEDLMNVPLEENKAGLF 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g00051 305 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 117 IPR017930 -
Mepo7g00051 305 FunFam Transcription factor MYB30 69 127 - -
Mepo7g00051 305 FunFam MYB-related transcription factor 14 67 - -
Mepo7g00051 305 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 2 231 - -
Mepo7g00051 305 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Mepo7g00051 305 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 66 IPR017930 -
Mepo7g00051 305 Gene3D - 69 142 - -
Mepo7g00051 305 SUPERFAMILY Homeodomain-like 12 109 IPR009057 -
Mepo7g00051 305 SMART sant 14 64 IPR001005 -
Mepo7g00051 305 SMART sant 67 115 IPR001005 -
Mepo7g00051 305 Gene3D - 14 67 - -
Mepo7g00051 305 CDD SANT 70 113 IPR001005 -
Mepo7g00051 305 CDD SANT 17 62 IPR001005 -
Mepo7g00051 305 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Mepo7g00051 305 Pfam Myb-like DNA-binding domain 68 113 IPR001005 -
Mepo7g00051 305 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g00051 Mepo-Chr7 1253723 1255964 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g00051 2 288 MYB Transcription Factor Family AT5G62470 50.852 3.86e-105 309
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mepo7g00051 Myb_DNA-binding 2.3e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g00051 K09422 - gmx:100807020 400.593