Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g00046 ATGAGTAGTAGCGCTTCAAGCGGGGATGATGATCACAAAAGGCAAAAGCTTAGTCCGTCATCATTATCATTATCAGCTGACGAAGCTGGTCAAGGAGGTAACACTGGTGGAGCTGAAGAAGCTGATCAAGGAGATAGCACTGGAGGAAGAGGAGGAGGAGGGGACTGTCTAAAGAAAGGTCCGTGGACGTCGGCAGAGGATGATATTTTGATAGCTCATGTTAAAAAGCACGGAGAGGGAAATTGGAGTGCAGTCCAAAAGTATACAGGACTTGCTCGTTGTGGGAAAAGCTGTCGTCTACGATGGACAAACCATTTGAGACCAGATCTGAGAAAGGGTGCAATTACCGCTGAAGAAGAACACCGAATCCTGGAGTTGCACTTTAAGATGGGAAATAAATGGGCTCAAATAGCTGCACTGTTGCCTGGACGTACAGTTAATGAGATAAAGAACTTTTGGAACACAAGATATAAGAAACGAACACGAGCTAACTTACCAGTCTACCCTGAAGAGATAAGATCCAAACGTCCCTTGAATGGTAATCAAGAAAATGCCGACACATTCACAAATGAAGCCAGCCAGAGTGATGAAACAGTAAATTTGAGTATACCTGACGTGGAATTCAAAGATTACAAACTCCGCCAAGATATAATACCACCATGTTTTGATATATGGGGAAGTGGCTTGGTTGGACATCGTTCAGATTCAACATGCAATAATTTGTACGGTTGTAGCAGTAGTGCTGCTGTCCCAGCAACATTTGATCAGTGCGTTAAATATCCTATTATGTTGTCTCCTCCATTTAATCAGTATCAAGGATATAATAACCTTCTGGTCGATATTCATGCCACATCAAATATTTCTTCTTCTGAGCTCCCTTCACTCCAATATTTACCGACTCAACAATATAGCTGGGGCGGCATGCCTTCGTCAATTCAGCCTCCTCCAGTTCCAACTTCTCTACCATTACTTGATTCATTGCAAGTGAAAACGGTAAACACAGCGCCCAATGAACCGGACATTGGTATACAATGGAATGAGCTAGAGGATCAGTCTGCTGCTTCAATTCTGTCATCTGACTATAACACACATCATATGAACATGAACATGTGGAGGAGTACGATCGGTAGCTTGCAGAGGCTCTCCCGTGGTTGCTCTGTTGATGAGGCTTTCGCACTTCGCACTTGGACTAAAGTTGCCAGTGACAAGTCAATGAGCAGGTTATATGGTGCCGGGAACTTAGCAGGCAACTACTGCAAGGGCATTGCTGCAACTCTTAAGTTTACCCTGAATGCTGGAGAGGGGTATTCAAGGCGACCGAGCTCACTCCTGAAATGCCGGAAATGA 1347 0.4432 MSSSASSGDDDHKRQKLSPSSLSLSADEAGQGGNTGGAEEADQGDSTGGRGGGGDCLKKGPWTSAEDDILIAHVKKHGEGNWSAVQKYTGLARCGKSCRLRWTNHLRPDLRKGAITAEEEHRILELHFKMGNKWAQIAALLPGRTVNEIKNFWNTRYKKRTRANLPVYPEEIRSKRPLNGNQENADTFTNEASQSDETVNLSIPDVEFKDYKLRQDIIPPCFDIWGSGLVGHRSDSTCNNLYGCSSSAAVPATFDQCVKYPIMLSPPFNQYQGYNNLLVDIHATSNISSSELPSLQYLPTQQYSWGGMPSSIQPPPVPTSLPLLDSLQVKTVNTAPNEPDIGIQWNELEDQSAASILSSDYNTHHMNMNMWRSTIGSLQRLSRGCSVDEAFALRTWTKVASDKSMSRLYGAGNLAGNYCKGIAATLKFTLNAGEGYSRRPSSLLKCRK 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g00046 448 Gene3D - 56 112 - -
Mepo7g00046 448 FunFam MYB-related transcription factor 58 111 - -
Mepo7g00046 448 SMART sant 111 159 IPR001005 -
Mepo7g00046 448 SMART sant 58 108 IPR001005 -
Mepo7g00046 448 CDD SANT 116 155 IPR001005 -
Mepo7g00046 448 SUPERFAMILY Homeodomain-like 57 153 IPR009057 -
Mepo7g00046 448 Gene3D - 116 160 - -
Mepo7g00046 448 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 111 161 IPR017930 -
Mepo7g00046 448 MobiDBLite consensus disorder prediction 1 58 - -
Mepo7g00046 448 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 57 110 IPR017930 -
Mepo7g00046 448 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 40 340 - -
Mepo7g00046 448 Pfam Myb-like DNA-binding domain 59 106 IPR001005 -
Mepo7g00046 448 Pfam Myb-like DNA-binding domain 112 155 IPR001005 -
Mepo7g00046 448 ProSiteProfiles Myb-like domain profile. 107 157 IPR001005 -
Mepo7g00046 448 ProSiteProfiles Myb-like domain profile. 54 106 IPR001005 -
Mepo7g00046 448 CDD SANT 61 106 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g00046 Mepo-Chr7 906054 910125 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g00046 40 224 MYB Transcription Factor Family AT5G06100 52.821 1.06e-58 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mepo7g00046 Myb_DNA-bind_6 7.1e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g00046 K09422 - psat:127085601 289.656