Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g00044 ATGAATAAAGATCGCAGGCATGACTATGAGAAATCTTATGAAGGGTCGGAAGAGACGAGAAGATCTTGTTCCCCGTTGTCTAGAAACGAAGATGATACTAAGATGTCATTGAATGATGAAGTTCTTGTTCAAGAATCAAAATACAAATGCAATACTTGTGGTAAGACTTTCGGCAACGGAAAAGCATTGGGTGGTCACCGAAGATCTCACTTTCTCAAGATGAAGCCTAATCATCATCAATCACAACAAGGTAAGGCTTGTTATATTTGCGAGAAGAAGTTTCCAACCAAGAATGCTCTGTGTGGTCACATGATCAAATCTCATCCTGATAGGGTTTCTAAAGGAGTTAGTTCTCCTTCAAATCATGATATCCAAAAATCTTCTTCATCCAACAGTTCTAACCGTTCTACTCAACAGAATAAAGAAGATAATCTTTCTTTACCAAAATGGCAGAATAGAGGTAAAAGAGGTAGACAATGTATTGGTGTTGTCGAGGCTGCTACAACTCTCTTACTTCTTAGGTCTGATAAGTACCTTTGTACTTTGTCGATTGATGAGCAAAAGTGTTCTGAATTTCCACTTCCCATCAAGAAAAGATATTGTTATGTTGACGAGTCGTCGTCAAATGGTGGTAATGGTGATGAGAGTGAGAACAATGATGAAGAGAAAGCAAGTAATGATGCCGCTGCTGAACAAAATAAATTGAATTTTGATTTGAATGAGTCATATCTAATGGAGGAGTAA 744 0.3763 MNKDRRHDYEKSYEGSEETRRSCSPLSRNEDDTKMSLNDEVLVQESKYKCNTCGKTFGNGKALGGHRRSHFLKMKPNHHQSQQGKACYICEKKFPTKNALCGHMIKSHPDRVSKGVSSPSNHDIQKSSSSNSSNRSTQQNKEDNLSLPKWQNRGKRGRQCIGVVEAATTLLLLRSDKYLCTLSIDEQKCSEFPLPIKKRYCYVDESSSNGGNGDESENNDEEKASNDAAAEQNKLNFDLNESYLMEE 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g00044 247 MobiDBLite consensus disorder prediction 203 247 - -
Mepo7g00044 247 Gene3D Classic Zinc Finger 43 121 - -
Mepo7g00044 247 ProSiteProfiles Zinc finger C2H2 type domain profile. 48 75 IPR013087 -
Mepo7g00044 247 MobiDBLite consensus disorder prediction 109 151 - -
Mepo7g00044 247 ProSitePatterns Zinc finger C2H2 type domain signature. 50 70 IPR013087 -
Mepo7g00044 247 MobiDBLite consensus disorder prediction 1 36 - -
Mepo7g00044 247 SUPERFAMILY beta-beta-alpha zinc fingers 44 72 IPR036236 -
Mepo7g00044 247 ProSitePatterns Zinc finger C2H2 type domain signature. 87 108 IPR013087 -
Mepo7g00044 247 MobiDBLite consensus disorder prediction 113 147 - -
Mepo7g00044 247 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY-RELATED 20 241 IPR044653 GO:0003700
Mepo7g00044 247 SMART c2h2final6 48 70 IPR013087 -
Mepo7g00044 247 SMART c2h2final6 85 108 IPR013087 -
Mepo7g00044 247 Pfam C2H2-type zinc finger 87 110 - -
Mepo7g00044 247 Pfam C2H2-type zinc finger 48 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g00044 Mepo-Chr7 903126 903869 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g00044 45 113 C2H2 Transcription Factor Family AT3G46090 35.897 1.14e-07 48.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mepo7g00044 zf-C2H2_6 0.00096 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g00044 - - tpra:123915298 202.986