Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g00039 ATGATATCTCAGACTCATTCATGTGTTGTGATTGCAAAAATAATATTTTTTGTTACAGCGCAAATTACTGTAGGAGTAAATTCCTTTTTAGAAGTTGATAAGATAAGTAGTTTACCTCAGCAGCCAAAAGTAGGATTTCAACAATATGCTGGTTACATTACAGTTGATGAAGTGCAGAAAAGAGCTTTGTTTTACTACTTTGTTGAAGCAGAAGTTGAACCAGCTTCCAAGCCAGTAGTGCTTTGGTTAAATGGAGGGCCTGGTTGTTCTTCTGTTGGAGCTGGAGCTTTTGTGGAGCATGGTCCATTCAAACCAACTAAAAATGGTCTTATTAAAAATGATTACAGCTGGAACAAAGAGGCAAACATGCTGTACTTGGAATCACCGGCGGGTGTTGGTTTCTCCTACTCTACTAATGAATCATTCTATGACTCTGTGAACTATGATATGACAGCTCTATGTTCTGCAGCAAGGGATAATCTTGTTTTTTTACAACATTGGTTCACTAAATTCTCAGAATACAAAAACAATGAGTTCTTTATCACAGGGGAGAGCTATGCAGGTCACTATGTACCCCAACTTGCACAACTCATTGTTCAAACCAAAAGCAAATTCAATCTCAAGGGAATTGCAATAGCGAATCCTCTTCTGGAATTCAACACAGATTTCAACTCTAGAGCTGAGTATCTCTGGTCTCATGGACTGATATCAGATTCAACCTATAATTCCTTCACAAAAATATGCAACTTTTCACAAATTAGAAGACAATATGCAAGCGGCGCACTTACTACCGTTTGTGCAAGAGTAAATAGGCTAGTGTCGATGGAGGTTAAGAAGATAGATGTCTGTGTGGAAGATGAAACATTCACATACTTGACTAGGAAAGAAGTGCAAAAAGCTCTTCATGCTAAGCTTGTAGGGATCACCACATGGACACTTTGTAGTGGAGTTCTCAAATATGACATGCAAAATTTAGAGATTCCAACCATATCTATTCTGGGAACACTTGTTAAGTCAGGTGTAAGAGTTCTTGTGTACAGTGGAGATCAAGATTCAGTAATACCTTTGCTTGGAACACGGTCTTTAGTAAATGGATTAGCCAAAGACTTCGGTTTGAACACCACAGAGTCCTATAGAACTTGGTTTAATGGAAGACAGGTAGCTGGATGGACACAAGTATATGGTAACATGTTATCATTTGCAACCATAAGAGGAGCATCTCATGAGGCTCCATTTTCACAACCGGGGAGATCGTTGGTGCTGCTAAAGGCATTTTTGGAAGGAAAATCACTTCCAACTATTCTTTGA 1308 0.3876 MISQTHSCVVIAKIIFFVTAQITVGVNSFLEVDKISSLPQQPKVGFQQYAGYITVDEVQKRALFYYFVEAEVEPASKPVVLWLNGGPGCSSVGAGAFVEHGPFKPTKNGLIKNDYSWNKEANMLYLESPAGVGFSYSTNESFYDSVNYDMTALCSAARDNLVFLQHWFTKFSEYKNNEFFITGESYAGHYVPQLAQLIVQTKSKFNLKGIAIANPLLEFNTDFNSRAEYLWSHGLISDSTYNSFTKICNFSQIRRQYASGALTTVCARVNRLVSMEVKKIDVCVEDETFTYLTRKEVQKALHAKLVGITTWTLCSGVLKYDMQNLEIPTISILGTLVKSGVRVLVYSGDQDSVIPLLGTRSLVNGLAKDFGLNTTESYRTWFNGRQVAGWTQVYGNMLSFATIRGASHEAPFSQPGRSLVLLKAFLEGKSLPTIL 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g00039 435 FunFam Carboxypeptidase 329 428 - -
Mepo7g00039 435 ProSitePatterns Serine carboxypeptidases, serine active site. 181 188 IPR018202 GO:0004185
Mepo7g00039 435 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 136 IPR001563 GO:0004185|GO:0006508
Mepo7g00039 435 PRINTS Carboxypeptidase C serine protease (S10) family signature 113 125 IPR001563 GO:0004185|GO:0006508
Mepo7g00039 435 PRINTS Carboxypeptidase C serine protease (S10) family signature 398 411 IPR001563 GO:0004185|GO:0006508
Mepo7g00039 435 PRINTS Carboxypeptidase C serine protease (S10) family signature 167 192 IPR001563 GO:0004185|GO:0006508
Mepo7g00039 435 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 34 415 IPR001563 GO:0004185|GO:0006508
Mepo7g00039 435 ProSitePatterns Serine carboxypeptidases, histidine active site. 398 415 IPR033124 GO:0004185
Mepo7g00039 435 Gene3D - 330 428 - -
Mepo7g00039 435 Gene3D - 285 318 - -
Mepo7g00039 435 SUPERFAMILY alpha/beta-Hydrolases 27 433 IPR029058 -
Mepo7g00039 435 Gene3D alpha/beta hydrolase 30 284 IPR029058 -
Mepo7g00039 435 FunFam Carboxypeptidase 30 285 - -
Mepo7g00039 435 Pfam Serine carboxypeptidase 42 428 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g00039 Mepo-Chr7 860470 869354 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g00039 295 431 Calmodulin-binding Proteins AT2G22960 29.197 3.09e-16 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g00039 K16297 - gmx:100805028 685.641