Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g00038 ATGATGTCAAGGAGAGCAACATTCTGGTGTCATACATGCAGGCAGCCAATCTTGCTTGCAGGGAGGGATGCAGTTTGCCCATACTGCGATGGAGGATTTGTGCAAGAAATGCATGAGAATCGAGGACTTGCATCGTCATCACAGTTGGAAGAGTTTCAAGATGATCCTGATATTTTCGATGCTATACATGCTGTTGTAAGTCAAAGAGGTTCTGTACCAAGAATTGGGTTTAGAGATGCTATTGATAGTTACATGAGACAGAGAATGGATGGAAGAACCACAAACTTTGATGTCAGAAGGAGATCTGTTTCTGGTTCTGTTCCTGAACAAACTTGGGGTGTTTTTAGTTCTTCTGGTCGTTATTTAATATTTCAAGGTCAAACACCTAGCTCTAGAGGTGATCCTAGGCGCTCTGATTTTGGTGGCTACTTTATGGATCACGGCCTAGATGAACTTATCGAACAACTCAATACAAACGGTCGTGGTCCAGCCCCGGCCTCACGATCTTCAATTGAAGCAATGCCTACCATTAAGATCACACAAGCACATCTTCACTCCGATTCACATTGTCCAATTTGTATAGAAAGGTTTGAACTCGGCTCTAAGGCAAGGGAAATGACATGTAAGCATATCTACCACTCAGACTGCATTGTTCCTTGGTTAATTCAACATAATTCATGTCCTGTTTGCCGTGTTGAGCTTCCGCCTCATGGACGTGGTAGTCGAAACTGGGGAAGAAGGAATGACAATAGTACTGGTCAAAACAATAATGGCCGAGGAAGGAGAAATCCATTTTCCTTTTTGTGGCCATTTCGTTCTTCCAATTCAAATACTAATCATTGA 843 0.4259 MMSRRATFWCHTCRQPILLAGRDAVCPYCDGGFVQEMHENRGLASSSQLEEFQDDPDIFDAIHAVVSQRGSVPRIGFRDAIDSYMRQRMDGRTTNFDVRRRSVSGSVPEQTWGVFSSSGRYLIFQGQTPSSRGDPRRSDFGGYFMDHGLDELIEQLNTNGRGPAPASRSSIEAMPTIKITQAHLHSDSHCPICIERFELGSKAREMTCKHIYHSDCIVPWLIQHNSCPVCRVELPPHGRGSRNWGRRNDNSTGQNNNGRGRRNPFSFLWPFRSSNSNTNH 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g00038 280 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 121 235 - -
Mepo7g00038 280 MobiDBLite consensus disorder prediction 238 280 - -
Mepo7g00038 280 FunFam E3 ubiquitin-protein ligase RING1-like 152 237 - -
Mepo7g00038 280 SMART ring_2 190 230 IPR001841 -
Mepo7g00038 280 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 154 237 IPR013083 -
Mepo7g00038 280 ProSiteProfiles Zinc finger RING-type profile. 190 231 IPR001841 -
Mepo7g00038 280 SUPERFAMILY RING/U-box 170 237 - -
Mepo7g00038 280 Pfam zinc-ribbon 7 37 IPR039525 GO:0061630
Mepo7g00038 280 MobiDBLite consensus disorder prediction 245 280 - -
Mepo7g00038 280 Pfam Ring finger domain 189 231 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g00038 Mepo-Chr7 815725 817689 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g00038 135 248 C3H Transcription Factor Family AT5G01980 40.171 1.83e-23 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g00038 K11982 - cam:101496968 460.299