Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g04422 ATGGGCGCGCACTCTTATTTAATTGTGCGCGCACCTGCTGCATTTAATAATGTCAAGTTCTTGGTTGTTATTATGGTATTATTACTACATTCATGCACAAGCATGTCAATGTCATCTTCAGATGCCGATGCGCTATTGAAGTTCAAGGGTTCATTGACAAATGCGGTGGCCCTCAGCAGTTGGGATCCATCCATAAACCCAAAACCACCTTGTCAAGGAAACATTCCCAATTGGGTGGGCTTGTTTTGTTTGAATGACAGGGTGTGGGGGTTACGCCTTGAGAGCATGGGATTAACCGGAAATATTGATTTGGCATCTCTTGCTTCAATGCCGGCATTGCGAACACTTAGCCTAATGAACAATACATTTGTTGGTCCCTTGCCTGACATAAAGTTGTTGCCCAATTTGAGGGCCCTTTACCTGTCCTATAATCATTTCTCAGGACAAATACCCGATGATGCATTTGCAGGTTTGCCTAGGTTGAGGAAAGCGTATTTGTCTAATAATGAGTTCATCGGTAAAATTCCATCATCTATTGTTACCTTGCCTATTATTGTCGTCCTTAGGCTTGACTCAAACAAGTTTCAAGGTGAAATCCCAAATTTTCAAAACAAGAGTAGTTTGAAAATTATCAACTTATCTAACAACGAGTTAGAGGGTCCTATACCACCTAATCTAAGACACTTCGACGCCTCCTCATTTAGCGGAAATGCACTTCTATGCGGGCCTCCTTTGATGAATCAATGTCAATTACCTGCAGCAGGAAAGGAGACTAGTACTCTGGCCAATCTTTTCGTTATGAAAACTTCACTTATTGTGATTACGATAGCATTTTTAGTAGTCATTGTGGTTTCAATATTTGTCATATTTCGTTTGAGGTCCCAGAAGAAGCAGTTAGATGATGAACATCATTCTTCTATGATTTCAACATTCCATGCGCAGGCCTCTAAAAAATATGTTAAGCCTCCTGTAGTTTATGTGAAAACCAAAAGTTTGGCCGAACATTATGATCCCAAAAGTCCTAAGCATGATCACCACAGTCATGGACATTCAAAAAAGGGGGAACAAGGCAAGCTTATATTCCTTAGGCAGGATGGAATCACGTTTGATTTACAGGATTTGCTAAAGGCATCTGCTGAAATTCTAGGTAGTGCCTCATTTGGGTCATCCTATAAAGCCGTGATTTTGGACGGACTTAAGTCTGTGGTTGTCAAAAGGTACAAGCAGATGAATAATGTACCGAGAGAAGAGTTCCATGAGCACATGCGAAGGTTAGGAAACCTTAACCACCCCAATGTTCTACCTCTCATTTCTTATTATTATAGAAGAGAAGAGAAGCTTTTGATCTCTGGCTTTGTTCACAACGGTTGCTTGGGTAGTCATCTTCATGGTAACCACAACTATGAGAAGCCAGGACTTGATTGGGGAACCCGTTTGAAAATCGTGAAAGGTGTAGCAAGGGGTTTGTCTTATCTATACAGTGCACTCCCAAGTGTGATTGTACCTCATGGTCATCTAAAATCTTCGAATGTACTTTTAGATGAATCATTTGAGCCCTTGCTCACTGATTATGCCCTAAGTCCTGTGATAAACCTTGACCACGCCCAACAAATCATCATGCCTTACAAATCCCCGGAGTATGCTCAACTGGGTCGTATTACAAAGAAAACTGATGTGTGGAGTTTTGGGATTCTAATATTGGAGATACTAACGGGTAAATTCCCAGAGAACTATATTGCACCCAGGTATAATAGTGATTCTGACTTGGCTAGTTGGGTAAATATGTTAATCACTGAGAAGAGGACAAGTGAGGTATTTGACGTAGAGATGGGAGGAATCGGAACTAGTAAAGCTGAATTACTCAAACTCTTAAAGATTGGACTAAGTTGTTGTGAAGAGAATGTTGAAAGAAGGTTGGACATCAAAGAGGCTCTTGAACAGATTGAAGAATTGAAAGAAACAACAACTGATGGAGGAGGAGGAGAATACTCTTCCTCCCTTATCACCACTACCGAAAGGGATGCTTACAGAGCTGTGTGA 2040 0.4098 MGAHSYLIVRAPAAFNNVKFLVVIMVLLLHSCTSMSMSSSDADALLKFKGSLTNAVALSSWDPSINPKPPCQGNIPNWVGLFCLNDRVWGLRLESMGLTGNIDLASLASMPALRTLSLMNNTFVGPLPDIKLLPNLRALYLSYNHFSGQIPDDAFAGLPRLRKAYLSNNEFIGKIPSSIVTLPIIVVLRLDSNKFQGEIPNFQNKSSLKIINLSNNELEGPIPPNLRHFDASSFSGNALLCGPPLMNQCQLPAAGKETSTLANLFVMKTSLIVITIAFLVVIVVSIFVIFRLRSQKKQLDDEHHSSMISTFHAQASKKYVKPPVVYVKTKSLAEHYDPKSPKHDHHSHGHSKKGEQGKLIFLRQDGITFDLQDLLKASAEILGSASFGSSYKAVILDGLKSVVVKRYKQMNNVPREEFHEHMRRLGNLNHPNVLPLISYYYRREEKLLISGFVHNGCLGSHLHGNHNYEKPGLDWGTRLKIVKGVARGLSYLYSALPSVIVPHGHLKSSNVLLDESFEPLLTDYALSPVINLDHAQQIIMPYKSPEYAQLGRITKKTDVWSFGILILEILTGKFPENYIAPRYNSDSDLASWVNMLITEKRTSEVFDVEMGGIGTSKAELLKLLKIGLSCCEENVERRLDIKEALEQIEELKETTTDGGGGEYSSSLITTTERDAYRAV 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g04422 679 FunFam pollen receptor-like kinase 1 345 452 - -
Mepo6g04422 679 Pfam Leucine rich repeat 134 195 IPR001611 GO:0005515
Mepo6g04422 679 SUPERFAMILY L domain-like 68 246 - -
Mepo6g04422 679 SUPERFAMILY Protein kinase-like (PK-like) 380 651 IPR011009 -
Mepo6g04422 679 Gene3D Ribonuclease Inhibitor 33 126 IPR032675 -
Mepo6g04422 679 Gene3D Phosphorylase Kinase; domain 1 343 452 - -
Mepo6g04422 679 FunFam Pollen receptor-like kinase 1 453 659 - -
Mepo6g04422 679 Pfam Protein tyrosine and serine/threonine kinase 380 592 IPR001245 GO:0004672|GO:0006468
Mepo6g04422 679 Gene3D Transferase(Phosphotransferase) domain 1 453 662 - -
Mepo6g04422 679 Gene3D Ribonuclease Inhibitor 129 251 IPR032675 -
Mepo6g04422 679 Coils Coil 634 654 - -
Mepo6g04422 679 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 128 222 - -
Mepo6g04422 679 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 27 654 IPR046959 -
Mepo6g04422 679 ProSiteProfiles Protein kinase domain profile. 376 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g04422 679 Pfam Leucine rich repeat N-terminal domain 39 83 IPR013210 -
Mepo6g04422 679 Pfam Leucine Rich Repeat 207 229 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g04422 Mepo-Chr6 56329807 56331938 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g04422 40 661 Receptor kinase-like Gene Family AT1G50610 48.762 0.0 566
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mepo6g04422 PK_Tyr_Ser-Thr 1.2e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g04422 - - gmx:100801053 930.243