Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g04420 ATGAGCAATAGCATGCAAAACATGAAGACTACTACAGGTTCCACATCTCATGGTTCATCCTCATCCTCCAATGGTCTCCTCACCGTCACCATTGCCAGCAGCACTCACCCTCATGGCCCCGCTGCCAACGACGATGACGATGACCTCCTCGTTGATCCTGACGATCCTTTTGATATTACACAGACTAAAAATGCTCCTCCCGAGACCCTCAAGCGTTGGCGACAAGCAGCATTTGTTCTCAATGCGTCGAGGCGTTTTAGATATACTCTCGACTTGAAAAAGGAAGAGGAGAAAGAACAAAAGAAAAGCATGATTAGAGCTCATGCACAAGTCATCAGAGCTGCTTTGCTTTTCAGAATGGCCGGTGAACGCGAACTAGGTACATCAGTGGCATCCACAATAACTCCAGGTGGTGACTATGAAGTTGGACTCGAACAACTTGTTTCAATGTCCAAGAATCAAAACATTTCAACTTTACAACAATATGGAGGGGTTAAAGGCTTATCAGGTTTTCTAAAGTCAGATTTGAATAAAGGGATTAGTGGAGATGATGATGATCTATCAAAGAGGAAAAATGCATTTGGAACTAATACATATCCTCGGAAAAAGGGTAGAAGTCTTTGGAGGTTTCTATGGGAAGCTTGGCAGGATCTGACCCTTATTATATTGATTATAGCAGCTGTAGTATCATTAGTACTTGGAGTATATGAAAAGGCCATAAGAGGTGGCAGAACAATAAAAATATCGATATTTGAAATTGTCGTTGGTGATGTACTGCCCCTTAAAATAGGAGATCAGGTTCCTGCTGACGGAGTTTTAATTACTGGTCACTCACTTGCCATTGATGAATCCAGCATGACTGGTGAAAGCAAGATTGTTCACAAGGATCACAGAGCACCATTTTTTATGTCAGGCTGCAAAGTAGCAGATGGAGTTGGTTCTATGCTGGTAACTAGTGTTGGTATAAATACTGAGTGGGGATTGTTGATGGCAACTATCTCAGAGGACACTGGAGAAGAGACTCCACTACAGGTACGATTGAATGGAGTAGCAACTTTTGTTGGTATTGTTGGGCTTACTGTAGCCATAGCTGTTCTTGTAATTCTCTTGGGAAGATACTTTTCTGGCCATACAACGGGTTCAGATGGAAAAGTGCAATTTGTTTATAAGGTGACTAAGATCGACAAAGTTGTAGAAGGGTTCATCGCAATTTTTACCATTGCTGTAACAATTGTGGTTGTCGCAGTGCCAGAAGGTTTACCTTTAGCAGTTACCTTAACCCTGGCATACTCGATGCGGAAGATGATGGCAGACAAAGCTCTGGTGCGAAGGCTATCAGCCTGCGAAACCATGGGCTCTGCTACGACAATTTGCAGTGATAAAACTGGAACTTTGACCTTAAACCAGATGACTGTAGTTGAGGCATATGCTGGTGGGAGGGAGAAATTAAATCCACCAGATGACTTGTCAAAATTGCATCCAGAAGTTTTATCTCTGATAAATGAAGGCATAGCACAAAATACAACAGGCAATATTTTCGTTCCTAAGGATGGTGGAGAGACAGAGATTTCAGGATCTCCTACAGAGAAGGCAATTCTATCTTGGGCAGTGAAGTTGGGAATGAATTTTGAACTTGTCAGATCAAGATCAAAGATTCTCCATGTCTTCCCCTTTAATTCTGAGAAAAAGCGAGGTGGTGTTGCTGTCAAACTGGCGGACTCTGAAGTGCATATACATTGGAAAGGAGCTGCTGAGATAGTTCTAGGAACATGTACCCAATATCTTGATTCAAATGGTCAACGACAATCTATTGAAGAAGAGAAGGCATTCTTCAGAAATGCAATTGATGACATGGCTGCCCAGAGCTTGCGTTGTATTGCTATTGCATACAGATCATACGAATTGGACAAAATTCCATCCAAGGAGGAGGATTTAGACCAGTGGTCCTTACCCGATCATGAGCTTGTTTTGCTTGCTATTGTTGGAATAAAGGATCCTTGTCGCCCTGGAGTCAAAGAGGCTGTGAGATTATGCACTGAGGCTGGTGTTAAGGTACGCATGGTTACTGGGGATAATCTTCAAACAGCAAAAGCAATATCTTTGGAGTGCGGAATACTGGTTTCAGTTGAAGATGCAGTTGAGCCAAATATAATTGAAGGAAAGACATTCCGTGAACTCTCTGAAAAGGAAAGGGAACAAGTTGCTAAGAAAATAACTGTGATGGGAAGATCATCTCCAAATGACAAGCTTTTGCTCGTGCAAGCACTGAAAAAAGGAGGTGAAGTTGTTGCCGTCACAGGAGATGGCACTAATGATGCCCCTGCTCTTCATGAGGCAGATATTGGTCTTTCTATGGGCATCCAAGGAACTGAAGTTGCAAAAGAAAGCTCAGATATTATAATCCTGGATGATAACTTTGCATCAGTAGTGAAGGTTGTTCGCTGGGGACGTTCTGTTTATGCAAATATTCAGAAATTTATTCAGTTCCAGCTCACTGTAAATGTTGCTGCTCTTACTATCAATGTTGTGGCAGCTATATCTTCTGGTGGTGTTCCTTTAACCGCAGTACAGCTTCTGTGGGTCAACCTTATTATGGACACACTTGGGGCTCTTGCTCTGGCTACTGAACCTCCAACTGACAGCCTTATGCACAGATCACCAGTTGGCCGAAGGGAACCTCTAATTACAAATATCATGTGGAGGAACTTGCTCGTACAGGCTATTTATCAAGTGACTGTTCTTCTTGTTCTTAACTTTGCTGGTGAAAGTATTCTACATGAAGAATCTAAGGAACGTGCCTTAGAATTGAAGAATACTATAATTTTCAACACATTCGTCATGTGCCAAATATTCAATGAATTCAATGCTCGAAAACCAGAAGGGATGAATGTTTTCAAGGGAGTGGCTCAGAACCGTCTCTTCGTCGGAATTGTGGGAGTGACTTTTGTACTTCAGATAATCATCATCGAGTTCCTTGGGAAGTTTGCAACAACAGTGAGGCTGAATTGGCAGCAGTGGCTTGCTTGTGTTGGTATTGGGCTGGTCAGCTGGCCACTTGCGGTTATTGGAAAATTAATTCCAGTTCCCAAAACACCAATGTCACGATCCATCTTGAGGGCGTTTAGGCGCTTGAAGAAGTCTCGTACTGCATAA 3153 0.4253 MSNSMQNMKTTTGSTSHGSSSSSNGLLTVTIASSTHPHGPAANDDDDDLLVDPDDPFDITQTKNAPPETLKRWRQAAFVLNASRRFRYTLDLKKEEEKEQKKSMIRAHAQVIRAALLFRMAGERELGTSVASTITPGGDYEVGLEQLVSMSKNQNISTLQQYGGVKGLSGFLKSDLNKGISGDDDDLSKRKNAFGTNTYPRKKGRSLWRFLWEAWQDLTLIILIIAAVVSLVLGVYEKAIRGGRTIKISIFEIVVGDVLPLKIGDQVPADGVLITGHSLAIDESSMTGESKIVHKDHRAPFFMSGCKVADGVGSMLVTSVGINTEWGLLMATISEDTGEETPLQVRLNGVATFVGIVGLTVAIAVLVILLGRYFSGHTTGSDGKVQFVYKVTKIDKVVEGFIAIFTIAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYAGGREKLNPPDDLSKLHPEVLSLINEGIAQNTTGNIFVPKDGGETEISGSPTEKAILSWAVKLGMNFELVRSRSKILHVFPFNSEKKRGGVAVKLADSEVHIHWKGAAEIVLGTCTQYLDSNGQRQSIEEEKAFFRNAIDDMAAQSLRCIAIAYRSYELDKIPSKEEDLDQWSLPDHELVLLAIVGIKDPCRPGVKEAVRLCTEAGVKVRMVTGDNLQTAKAISLECGILVSVEDAVEPNIIEGKTFRELSEKEREQVAKKITVMGRSSPNDKLLLVQALKKGGEVVAVTGDGTNDAPALHEADIGLSMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALTINVVAAISSGGVPLTAVQLLWVNLIMDTLGALALATEPPTDSLMHRSPVGRREPLITNIMWRNLLVQAIYQVTVLLVLNFAGESILHEESKERALELKNTIIFNTFVMCQIFNEFNARKPEGMNVFKGVAQNRLFVGIVGVTFVLQIIIIEFLGKFATTVRLNWQQWLACVGIGLVSWPLAVIGKLIPVPKTPMSRSILRAFRRLKKSRTA 1050
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g04420 1050 ProSitePatterns E1-E2 ATPases phosphorylation site. 460 466 IPR018303 -
Mepo6g04420 1050 Gene3D - 67 120 - -
Mepo6g04420 1050 Coils Coil 601 621 - -
Mepo6g04420 1050 Gene3D - 468 666 IPR023299 GO:0000166
Mepo6g04420 1050 SUPERFAMILY HAD-like 456 871 IPR036412 -
Mepo6g04420 1050 Pfam Ca2+-ATPase N terminal autoinhibitory domain 54 97 IPR024750 GO:0005516
Mepo6g04420 1050 SFLD p-type atpase 440 818 IPR044492 -
Mepo6g04420 1050 SUPERFAMILY Calcium ATPase, transduction domain A 238 331 IPR008250 -
Mepo6g04420 1050 FunFam Calcium-transporting ATPase 65 121 - -
Mepo6g04420 1050 Pfam E1-E2 ATPase 238 436 - -
Mepo6g04420 1050 SFLD C1.7: P-type atpase like 440 818 - -
Mepo6g04420 1050 MobiDBLite consensus disorder prediction 1 37 - -
Mepo6g04420 1050 FunFam Calcium-transporting ATPase 184 334 - -
Mepo6g04420 1050 PRINTS P-type cation-transporting ATPase superfamily signature 282 296 - -
Mepo6g04420 1050 PRINTS P-type cation-transporting ATPase superfamily signature 681 691 - -
Mepo6g04420 1050 PRINTS P-type cation-transporting ATPase superfamily signature 766 785 - -
Mepo6g04420 1050 PRINTS P-type cation-transporting ATPase superfamily signature 659 670 - -
Mepo6g04420 1050 PRINTS P-type cation-transporting ATPase superfamily signature 790 802 - -
Mepo6g04420 1050 PRINTS P-type cation-transporting ATPase superfamily signature 458 472 - -
Mepo6g04420 1050 FunFam Calcium-transporting ATPase 9 plasma membrane-type 312 483 - -
Mepo6g04420 1050 Pfam haloacid dehalogenase-like hydrolase 455 780 - -
Mepo6g04420 1050 NCBIfam calcium-translocating P-type ATPase, PMCA-type 238 1028 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Mepo6g04420 1050 Gene3D - 238 334 - -
Mepo6g04420 1050 Gene3D - 335 1019 - -
Mepo6g04420 1050 FunFam Calcium-transporting ATPase 659 811 - -
Mepo6g04420 1050 MobiDBLite consensus disorder prediction 1 66 - -
Mepo6g04420 1050 Gene3D - 455 811 IPR023214 -
Mepo6g04420 1050 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 465 663 IPR023299 GO:0000166
Mepo6g04420 1050 Pfam Cation transporter/ATPase, N-terminus 163 230 IPR004014 -
Mepo6g04420 1050 SUPERFAMILY Calcium ATPase, transmembrane domain M 162 1028 IPR023298 -
Mepo6g04420 1050 SMART Cation_ATPase_N_a_2 164 235 IPR004014 -
Mepo6g04420 1050 FunFam Calcium-transporting ATPase 783 1030 - -
Mepo6g04420 1050 PANTHER CATION TRANSPORTING ATPASE 106 236 - -
Mepo6g04420 1050 FunFam Calcium-transporting ATPase 468 666 - -
Mepo6g04420 1050 NCBIfam HAD-IC family P-type ATPase 398 489 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mepo6g04420 1050 NCBIfam HAD-IC family P-type ATPase 732 848 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mepo6g04420 1050 Pfam Cation transporting ATPase, C-terminus 851 1026 IPR006068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g04420 Mepo-Chr6 56297809 56310835 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g04420 19 1050 Primary Pumps ATPases AT3G21180 71.757 0.0 1537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g04420 K01537 - gmx:100817367 1628.99