Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g04419 ATGAGAGTACTTGTTATCTTCTTATTGCATTTGTATTCTGTTTGTGTTTGTGTTTGTGCACTCAACTCAGATGGGGTAGCACTCTTGTCATTCATGTCCCACTGGACATCAGTTCCTCCTTCCATAAACTCAACATGGATTCCATCTCATTCAACACCATGCTCATGGAAGGGTGTCAAATGCAACCCTTCCACTCACCGTGTGGTTTCTCTCAACCTTTCCTATTGTGAGATTCATGCTCCACTATCACCTGAAATTGCTAATTGCACACACCTCAACTACTTAGACCTTACTTCTAACTACTTTACCGGCCAAATACCTCACTCATTCGCTAATCTCCACAAACTCACCTATCTCAGCCTTTCTGTTAATCTACTCACTGGTCCATTTCCCCATTTCTTGACTCAAATTCACCTTCTTGATCTCTCTTATAACCAACTCACTGGTTCCATTCCAACTACTATTGCCAACATCACTCAACTTCGCTACTTGTATCTCGAAACTAACAAATTCTCTGGTATAATTCCATCATCCATTGGAAACTGTACTCAACTGGAAGAATTGTATTTCAATGGAAATCAGTTTCAGGGTGTCATCCCCCACACTCTAAATCATCTTCTCCGTTTAAATGTTGCCTCCAATAAACTAACAGGTATCATTCCATTAGGTTCTTCCGGTTGTCAAAATTTACTGTTTTTGGATATTTCATTCAATGCTTTTAGTGGAGGCATCCCCTCAGCCATTGGGAATTGTACTGCTTTATCACAGTTTGCTGCTGTTGAGTCTAACTTGGTTGGAACTATTCCATCCTCCATCGGTCTGCTCACCAACCTTAACCGTCTACGCCTTTCTCAGAACCATCTGTCAGGTAAAATACCTCCTGAAATCGGTAACTGCATGTCTTTGAATGAATTGCAATTGTATTCCAATCGACTTGAGGGAAACATTCCAAGTGAATTAGGAAAGCTGAGTAAATTGCAGGACCTTGAATTGTTTTCCAATCAATTGAGTGGTGAAATTCCACTTGCCATATGGAAGATTCAAAGTCTTGAGTATCTGCTTGTTTACAATAACAGTCTTTCCGGTGAACTTCCTGTGGAGATGACAGAGCTCAAGAACCTCAAAAACATCTCATTGTTTAACAACATGTTCTCTGGAGTCATACCTCAAAGCTTGGGATTCAATAGCAGTTTGTTGCAATTAGACTTTATAAATAATAGGTTCACTGGCAACCTCCCACCCAATCTTTGTTTTCGCAAAAAGCTAAGCGTTTTGAATATGGGCATCAATCAACTTCAAGGTAGCATACCTCTTGATGTTGGAAGATGCACAACTCTAAGAAGGGTCATTCTCAAACAAAACAACTTTACTGGGCCTCTTCCTGATTTCGAAACCAATCCCAATCTGTTATTCATGGAGATCAGCAGCAACAAAATCAACGGAACAATTCCATCAAGTTTAGGAAACTGCACAAATCTAACATATTTAATTTTGTCAAGGAACAAATTTAGTGGGCGTATACCACTAGATTTAGGAAACCTTGTGAATCTTCAGACTTTGATTCTTGATCACAACAACTTAGAAGGACCTTTGCCATTTCAGCTGTCAAATTGTACTAAAATGGACAAGTTTGATGTGGGATTTAACTTCTTAAATGGTTCATTGCCATCAAGTTTGCAGAGGTGGACAAAGCTAAACACATTAATTTTGACTGAGAATCATTTTAGTGGCGGCATTCCAGATTTCTTGTCGGCATTCAAAGATCTTTCTGAACTACGGCTTGGTGGCAATATGTTTGGTGGGAGAATTCCTAGATCGGTTGGGGCATTGCAGAATTTGATCTATGGTTTGAATCTAAGTTCTAATGGGCTGATAGGCGACATTCCTGTGGAAATCGGAAAACTGAAAACTTTGCAATTGCTGGATCTATCTCAGAACAATTTGACAGGAAGCATACAGGTTCTTGATGACCTCCCTTCATTGGTTGAAATCAATATTTCATACAATTCTTTTCAGGGTCCTGTTCCGAAGATGCTAATGAAGCTGCTCAATTCTTCCCTGTCATCATTTTTGGGGAATCCTGGGCTATGTATCAGTTGTTCACCATCCGATGGCTTGGTTTGCTCCAAAATCGGATATCTAAAACCATGTGATAACAAAACAGTTAATCACAAAGGCCTCAATAAAATTGCAATTGTGATGATAGCTCTAGGATCCTCAATATCTGTTGTTTTGCTTCTTCTGGGATTAGTTTATATCTTTTCTTATGGCAGAAAATCTAAGCAGCAAGTCCATTTCACTGATAATGGAGGTCCTTCGTACCTTCTTAACGAAGTCATGGAGGCTACATCGAACCTAAGTGATCGGTATATTATTGGAAGAGGAGCCCATGGAGTTGTTTATAAAGCCCTTGTAAGTCAAGACAAAGCGTTTGCTGTAAAGAAGCTGGCATTTGCTGCCAGCACAGGTAAGAACATGAGCATGGTCAGAGAAATTCAAACCCTTGGACAGATTAGGCATAGAAATCTTGTCAAATTGGAAAACTTTTGGTTGAGACAAGATTATGGTCTTATTCTGTATAGCTACATGCCAAATGGAAGCCTTTATGATGTATTGCATGAAAACAAACCAGCACCGTCCTTAGAATGGAATGTACGATATAAGATAGCCGTTGGAATTGCACACGGCTTAGCATACCTCCATTATGACTGTGATCCTCCCATAGTGCACCGAGACATCAAACCAAACAACATACTTCTAGACTCTGATATGGAGCCTCACATTGCCGACTTTGGTATTGCCAAACTTCTGGACCAGTCTTCTACATCAAACCCTTCCTTATCTGTGCCGGGCACAATTGGTTATATTGCACCAGAGAATGCTTATACAACAGTAAATAGTAGGGAGTGTGATGTGTACAGCTATGGAGTAGTTTTGCTTGAGCTGATAACCAGAAAGAAGGTAGCAGATCCGTCATTTATGGAGGGTACTGATTTAGTAGGTTGGGTTAGATTGATGTGGAGTGAAACAGGAGAAATTAATCAAATTGTTGATTCAAGCCTTGCAAATGAATTTCTAGATACCAATATAATGGAAAATGTTACTAAAGTGCTTATGCTGGCTTTTAGATGTACTGAGAAGGATCCACGCAAGAGGCCAACAATGACAGATGTTACCAAGCAATTATCAGATTCCAATCCACAGAAAATAAGTAAGAAGGGCTAG 3225 0.3978 MRVLVIFLLHLYSVCVCVCALNSDGVALLSFMSHWTSVPPSINSTWIPSHSTPCSWKGVKCNPSTHRVVSLNLSYCEIHAPLSPEIANCTHLNYLDLTSNYFTGQIPHSFANLHKLTYLSLSVNLLTGPFPHFLTQIHLLDLSYNQLTGSIPTTIANITQLRYLYLETNKFSGIIPSSIGNCTQLEELYFNGNQFQGVIPHTLNHLLRLNVASNKLTGIIPLGSSGCQNLLFLDISFNAFSGGIPSAIGNCTALSQFAAVESNLVGTIPSSIGLLTNLNRLRLSQNHLSGKIPPEIGNCMSLNELQLYSNRLEGNIPSELGKLSKLQDLELFSNQLSGEIPLAIWKIQSLEYLLVYNNSLSGELPVEMTELKNLKNISLFNNMFSGVIPQSLGFNSSLLQLDFINNRFTGNLPPNLCFRKKLSVLNMGINQLQGSIPLDVGRCTTLRRVILKQNNFTGPLPDFETNPNLLFMEISSNKINGTIPSSLGNCTNLTYLILSRNKFSGRIPLDLGNLVNLQTLILDHNNLEGPLPFQLSNCTKMDKFDVGFNFLNGSLPSSLQRWTKLNTLILTENHFSGGIPDFLSAFKDLSELRLGGNMFGGRIPRSVGALQNLIYGLNLSSNGLIGDIPVEIGKLKTLQLLDLSQNNLTGSIQVLDDLPSLVEINISYNSFQGPVPKMLMKLLNSSLSSFLGNPGLCISCSPSDGLVCSKIGYLKPCDNKTVNHKGLNKIAIVMIALGSSISVVLLLLGLVYIFSYGRKSKQQVHFTDNGGPSYLLNEVMEATSNLSDRYIIGRGAHGVVYKALVSQDKAFAVKKLAFAASTGKNMSMVREIQTLGQIRHRNLVKLENFWLRQDYGLILYSYMPNGSLYDVLHENKPAPSLEWNVRYKIAVGIAHGLAYLHYDCDPPIVHRDIKPNNILLDSDMEPHIADFGIAKLLDQSSTSNPSLSVPGTIGYIAPENAYTTVNSRECDVYSYGVVLLELITRKKVADPSFMEGTDLVGWVRLMWSETGEINQIVDSSLANEFLDTNIMENVTKVLMLAFRCTEKDPRKRPTMTDVTKQLSDSNPQKISKKG 1074
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g04419 1074 FunFam Leucine-rich repeat receptor-like kinase 25 140 - -
Mepo6g04419 1074 SUPERFAMILY RNI-like 70 427 - -
Mepo6g04419 1074 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 753 862 - -
Mepo6g04419 1074 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 421 706 - -
Mepo6g04419 1074 Gene3D Ribonuclease Inhibitor 24 136 IPR032675 -
Mepo6g04419 1074 Gene3D Ribonuclease Inhibitor 206 272 IPR032675 -
Mepo6g04419 1074 Pfam Protein kinase domain 791 1060 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g04419 1074 SMART serkin_6 786 1069 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g04419 1074 SMART LRR_typ_2 323 347 IPR003591 -
Mepo6g04419 1074 SMART LRR_typ_2 514 538 IPR003591 -
Mepo6g04419 1074 SMART LRR_typ_2 203 226 IPR003591 -
Mepo6g04419 1074 SMART LRR_typ_2 134 157 IPR003591 -
Mepo6g04419 1074 SMART LRR_typ_2 158 181 IPR003591 -
Mepo6g04419 1074 SMART LRR_typ_2 275 299 IPR003591 -
Mepo6g04419 1074 Gene3D Transferase(Phosphotransferase) domain 1 863 1073 - -
Mepo6g04419 1074 Pfam Leucine rich repeat 617 670 IPR001611 GO:0005515
Mepo6g04419 1074 Pfam Leucine rich repeat 70 126 IPR001611 GO:0005515
Mepo6g04419 1074 Pfam Leucine rich repeat 137 195 IPR001611 GO:0005515
Mepo6g04419 1074 ProSiteProfiles Leucine-rich repeat profile. 637 659 IPR001611 GO:0005515
Mepo6g04419 1074 MobiDBLite consensus disorder prediction 1049 1074 - -
Mepo6g04419 1074 Pfam Leucine rich repeat N-terminal domain 22 62 IPR013210 -
Mepo6g04419 1074 SUPERFAMILY Protein kinase-like (PK-like) 766 1062 IPR011009 -
Mepo6g04419 1074 Gene3D Phosphorylase Kinase; domain 1 752 862 - -
Mepo6g04419 1074 ProSitePatterns Protein kinases ATP-binding region signature. 792 815 IPR017441 GO:0005524
Mepo6g04419 1074 Gene3D Ribonuclease Inhibitor 137 205 IPR032675 -
Mepo6g04419 1074 SUPERFAMILY RNI-like 386 685 - -
Mepo6g04419 1074 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 319 1063 - -
Mepo6g04419 1074 ProSitePatterns Serine/Threonine protein kinases active-site signature. 908 920 IPR008271 GO:0004672|GO:0006468
Mepo6g04419 1074 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 154 420 - -
Mepo6g04419 1074 Gene3D Ribonuclease Inhibitor 443 704 IPR032675 -
Mepo6g04419 1074 Gene3D Ribonuclease Inhibitor 277 442 IPR032675 -
Mepo6g04419 1074 FunFam Serine/threonine-protein kinase-like protein CCR4 863 1074 - -
Mepo6g04419 1074 ProSiteProfiles Protein kinase domain profile. 786 1069 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g04419 Mepo-Chr6 56293483 56297030 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g04419 16 1064 Receptor kinase-like Gene Family AT1G73080 51.237 0.0 1020
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mepo6g04419 Pkinase 4.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g04419 - - gmx:100778035 1514.98