Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g04415 ATGGCATCATCTAAACAAGAAACAACGGAAATAATATTCAAGTCGAAACTACCAGACATATACATCCCCAACCATCTACCCCTTCATTCTTATTGTTTTGAAAATCTGTCCCAATTTGGTTCACGTCCATGTCTCATCAATGCTCCCACCGGAAAGGTCTACACCTACCACGACGTCGAACTCATCTCCCGTAAAGTTGCCTCTGGTCTCAACAAATTGGGAGTCAAACAAGGTGAAGTCATCATGATCCTCCTCCCCAATTCCCCTGAATTCGTCTTCTCTTTCCTTGGCGCTTCTTATCTCGGCGCTATAGCTACGGCAGCCAATCCTTTCTTCACGGCTGCAGAGATTGGAAAGCAAGCAAAAGCCTCCAACAGCAAGTTGATCATAACACAACAATGTTACTACGACAAAGTCAGTGATCATAAGGTAGTGTTGGTAGATGATAATAACAATAATGATCATTTGCATTTCTCAACGCTGATCGAAGCAGATGAGAATGATCTTCCTGATGCAAAGATCCAGCCAGACGATGTGGTTGCGCTGCCATATTCATCAGGAACAACAGGTCTGCCAAAAGGGGTGATGTTAACACACAAAGGTTTGGTGAGTAGCATAGCACAACAAGTAGATGGAGAGAATCCAAATCTATATTACAGCACTGAAGATGTGATACTTTGTGTACTTCCTCTGTTTCATATTTACTCATTAAACTCTGTTTTGCTCTGTGGACTCAGAGCCAAATCTACCATTCTCTTGATGCCAAAATTCGACATAAATGCATTCTTGAATCTTGTTAACAAACATGGAGTAACAGTTGCACCGGTTGTTCCTCCTATTGTATTGGCAATAGCAAAATCACCAGATCTTAATAAATATGATCTTTCTTCAATTAGGATATTGAAATCAGGTGGTGCTCCACTTGGTAAAGAACTTGAAGACACTGTTAGGACTAAATTTCCAAATGCAATTCTTGGACAGGGATACGGAATGACTGAGGCGGGACCAGTGTTAACGATGAGTTTAGCATTTGCTAAAGAAGCAGTGAATGTAAAAGCAGGTGCATGTGGAACTGTTGTAAGAAATGCAGAGATGAAGATTGTGGATCCTGAGACTGGTAAATCTTTACCTCGAAACCAATCTGGTGAAATCTGCATAAGAGGCGACCAAATCATGAAAGGTTATCTAAATGATCTCGAGGCAACAGAGAGAACCATAGACAAAGAAGGTTGGTTGTATACAGGTGATATTGGGTATATTGATGAAGATGATGAGTTATTCATTGTTGATAGATTGAAGGAATTGATCAAATACAAAGGATTTCAAGTTGCTCCAGCTGAACTTGAAGCTCTTCTTCTCTCTCATCCCAAAATCTCTGATGCTGCTGTTGTCCCAATGAAGGATGAAGCGGCTGGAGAGGTACCTGTTGCATTTGTGGTGAGATCAAATGGTTACACTGACTTAACTCAAGATGAAATTAAGCAGTTTATCTCCAAACAGGTGGTGTTTTACAAAAGAATAAATCAAGTATTCTTCATTGATGCAATTCCCAAGTCACCATCAGGCAAAATCTTGCGCAAGGATTTGAGAGCAAAGCTAGCAGCCGGTGTTCCACATTGA 1620 0.408 MASSKQETTEIIFKSKLPDIYIPNHLPLHSYCFENLSQFGSRPCLINAPTGKVYTYHDVELISRKVASGLNKLGVKQGEVIMILLPNSPEFVFSFLGASYLGAIATAANPFFTAAEIGKQAKASNSKLIITQQCYYDKVSDHKVVLVDDNNNNDHLHFSTLIEADENDLPDAKIQPDDVVALPYSSGTTGLPKGVMLTHKGLVSSIAQQVDGENPNLYYSTEDVILCVLPLFHIYSLNSVLLCGLRAKSTILLMPKFDINAFLNLVNKHGVTVAPVVPPIVLAIAKSPDLNKYDLSSIRILKSGGAPLGKELEDTVRTKFPNAILGQGYGMTEAGPVLTMSLAFAKEAVNVKAGACGTVVRNAEMKIVDPETGKSLPRNQSGEICIRGDQIMKGYLNDLEATERTIDKEGWLYTGDIGYIDEDDELFIVDRLKELIKYKGFQVAPAELEALLLSHPKISDAAVVPMKDEAAGEVPVAFVVRSNGYTDLTQDEIKQFISKQVVFYKRINQVFFIDAIPKSPSGKILRKDLRAKLAAGVPH 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g04415 539 Gene3D - 3 432 IPR042099 -
Mepo6g04415 539 ProSitePatterns Putative AMP-binding domain signature. 182 193 IPR020845 -
Mepo6g04415 539 Gene3D - 433 535 IPR045851 -
Mepo6g04415 539 FunFam Long-chain-fatty-acid--CoA ligase FadD 14 433 - -
Mepo6g04415 539 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 9 531 - -
Mepo6g04415 539 CDD 4CL 22 529 - -
Mepo6g04415 539 Pfam AMP-binding enzyme C-terminal domain 447 523 IPR025110 -
Mepo6g04415 539 SUPERFAMILY Acetyl-CoA synthetase-like 13 535 - -
Mepo6g04415 539 FunFam 4-coumarate--CoA ligase 2 434 536 - -
Mepo6g04415 539 Pfam AMP-binding enzyme 34 438 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g04415 Mepo-Chr6 56240073 56246521 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g04415 4 501 Monolignol Biosynthesis Gene Families AT1G51680 69.080 0.0 696
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g04415 K01904 - gmx:547944 856.67