Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g04414 ATGGAAGCAACAGCAGTGTTAGTGTTGGTGATCTTGTTCCTTAAAGCATTGTGTTCCAATTGTACAATTAATATTATCGTATCCAAGGATGGGAGTGGAGATTATACAGGTGTGGGTGAAGCTATCAGAAATGCCCCTGATTGGAGTCACCAACCTTACATCGTTCACATTTTAGCAGGCATTTATGAAGAGTACATCTTCATTCCACCGAGTAAGATTAATATTAAGCTCCTAGGTCATGGTTCAAACCACACAATACTTGTTGCTCACCAAAATGGTTCCACCATAGACATTCGTGGAGAAGGGTTCATGGCTCAAAACATTGGATTTGTGAACACAGCGGAGCTAGATGCAAGTGCTGCCGTGGCCGTTCGGAACGAAGCAAACAATAGCATATTCTTCCAATGCTCCATACAAGGATTCCAAGACACCTTATGGGCTGTTTCCGGTAGACAATTCTACAAAAACTGTGAAATCTACGGCACTGTCGACTTCATCTACGGGAACGCTGCCGCTGTATTTCAAGACTGCATGGTATATGCACGCTATCGAAAGTTTGTGACATTCACCGCACAATCACGTGAAAGTCCATATGAAAAAACAGGTTTCACATTCCAACATTGTAAATTCACCATGTCACCTGAAGATGAGAACAGAAAGTCAGAGGTGCATGCAACCTTAGGTCGTCCTTGGAGGGCATATTCAACAGTTGCTATATTGCATTGTTTCATAGATTCCATGGTTGATCCTAGAGGTTGGGAAGGGATGTCAGGTCTGCCCACTGATAAAGTTACTTATGTTGAGTTTGAGAATGTTGGACCTGGATCAAACACTGATGGTAGAGTGGATTGGCCTGGTGTTACAGTTCTTCGCAACGCAAACCATGCACTCCCTTTCACTGCTTCCTATCTCTTGGATGCTGACTCTTGGATTCCCTCTACAGGTGTTCCCTATCATAGTGGACTATAA 969 0.4334 MEATAVLVLVILFLKALCSNCTINIIVSKDGSGDYTGVGEAIRNAPDWSHQPYIVHILAGIYEEYIFIPPSKINIKLLGHGSNHTILVAHQNGSTIDIRGEGFMAQNIGFVNTAELDASAAVAVRNEANNSIFFQCSIQGFQDTLWAVSGRQFYKNCEIYGTVDFIYGNAAAVFQDCMVYARYRKFVTFTAQSRESPYEKTGFTFQHCKFTMSPEDENRKSEVHATLGRPWRAYSTVAILHCFIDSMVDPRGWEGMSGLPTDKVTYVEFENVGPGSNTDGRVDWPGVTVLRNANHALPFTASYLLDADSWIPSTGVPYHSGL 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g04414 322 PANTHER PECTINESTERASE 23 312 - -
Mepo6g04414 322 Pfam Pectinesterase 24 307 IPR000070 GO:0030599|GO:0042545
Mepo6g04414 322 Gene3D - 22 322 IPR012334 -
Mepo6g04414 322 FunFam Pectinesterase 4 21 322 - -
Mepo6g04414 322 SUPERFAMILY Pectin lyase-like 23 321 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g04414 Mepo-Chr6 56232198 56235927 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g04414 12 322 Carbohydrate Esterase AT4G03930 40.491 3.06e-78 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g04414 K01051 - gmx:102665195 442.965