Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g04404 ATGCCTTCAAGACAATTAACTTCTACAAGTTCCAATATTTTCACCAAACCAAAGTTTCTTTTCATAGCACTAACCATTTCAGCTTCTGTTGTCATCTTCTTCTCAATACTTTACTTCCTTTATCATCTTTGGCATTCACTTGTACATAGAGCTAAGACCATTCCTTTTGATGCAAGTGCTCCTTTGAAGCTACAAAGATTTTCTTACAAAGAGTTAAAGGTTGCTACCAATGGTTTTGACACTGCTAATATAATCGGCAAAGGTGGTTCTGGTACTGTTTTCAAGGGAGTACTTAAAGATGGAAAATTCATTGCCATCAAAAGGTTGGACTCTTTGTCTTTGCAATCAGAGAGAGAGTTTCAGAATGAGTTGCAGATTCTTGGAGGGTTGAGATCACCTTTTTTGGTGACCCTTTTGGGCTATTGTGTTGAAAAGAATAAGAGGGTTTTGGTTTATGAGTATATGCCTAATACAAGCTTGCAAGAGTCACTTTTTGGTGATGAGTGTTTTTGTTTGAGTTGGGAGAGAAGGTTTTGTATAATTATGGATGTTGCTAGAGCATTAGAGTTTTTGCACCTTGGATGTGATCCACCTGTGATTCATGGTGATATTAAGCCAAGTAATGTGTTGCTTGATGCTGAGTTTCGCGGGAAGATCTCTGACTTTGGTTTGTCAAGGATTAAGGTGGAGGGTGAATTTGGAGTTGACTTGTTTAGCCAGGATTTGGGGAAGAGCCAGGATCTTTGGAAGAGTCAAGACCTTTCAGGTAATTTGACTGCAGAAACTCCTGTAATTGGCACTCCTGTTGAGAGTGTTAGTGAAGTTGATTTTGCTCTTGCTTTGCAAGCTTCTACTTCATCCAAAAATAGTAGGAGTTGTTTAAATGTTAAAGCTTTGAACTTGAACTCTTTGAATTATAATGCAAATATTGTTGGTGAAAGTGAAAGTAGGAATGTAAATGCAAAGGGTAAGGAAATTTCAAGTTTGGATACAGGAGGAGGAGGGGATGATTGTTGGAATAGTAATAAGTTTGTTCCTTATGATGATGAGTTCTGTAGCACTGATTATAGTAAGGAGTTGGCTATTAATAATGCTTGTTTGGTTGATGAAGAGAAGGAAAATGGGAAACAATGGGGAGAAGATTGGTGGTGGAGACAAGATGGAAGTGGTGAATTATGTAGTAAAGACTATGTCAAGGAATGGATTGGAAGTCAGATTTGTCCATCAAATGCTGATTGGGATGATGGTATTGGCAGTGCTAAGATCAACAACATTCAGGAGAAATCTGAGTTGGAAAATTCAAGTCCAATTGATAAAGCCAGTGATGTAAATGGACCACAATTACTACAAGTATCTGTGATTGAAAATGCAGATAATGGAGTTGTAGATATAAAAGAGCTGAAGGGAAAGAAAAGCCACAAGAAGAAGAAGAATAGGAAGATGCAAGAGTGGTGGAAAGAAGAACATCTTGCTGAATTAAGCAAGAAAAAGTCCAATAAGCTGAAAAGTCTTCAAACCAAATGGAAGAAAGGCTTGAAAGTGCCACATTTTGGTTTAGGTAGAAGGTTCTATCTTTGCCAACGTAGTAAGAACTATGGAGAAGAAGGACAGAATGAGTGTGAACAAAATGGCGAGTTTAGCTTCAGAAGAGGTTGGAGGAAAAAAAGCTCGCGTTCGATTGGAAGTGATATGTGGAGTGGCGATCTTTTCAGCCGTGAACTCAGCAGCACAACTAGCATGAGAGGGACATTGTGTTATGTAGCACCAGAATATGGAGGGTGTGGATTCTTAATGGAGAAAGCTGATATCTACAGTTTTGGAGTTTTGATTCTTGTAATTGTATCAGGTAGAAGACCATTGCATGTTCTTGCATCTCCTATGAAGCTAGAGAAAGCTAATTTAATAAGCTGGTGTAGACACTTGGCTCAGGCTGGTGGTAACAACATCTTAGAACTAGTTGATGAGAAATTGAAAGAAGATGATTACAACAAGGAACAAGCAAGCCTTTGCATCAACTTGGCACTCACATGTTTACAGAAAATTCCAGAGTTGAGGCCAGATATTGGAGATATTGTTAAGATTTTGAAGGGGGAGATGGAGCTTCCACCACTTCCATTTGAGTTCTCACCTTCTCCACCTTCCAGATTATACAGCAGATCAAGGAGAAAACAAAAGGGGAATGCAGAATAG 2190 0.3872 MPSRQLTSTSSNIFTKPKFLFIALTISASVVIFFSILYFLYHLWHSLVHRAKTIPFDASAPLKLQRFSYKELKVATNGFDTANIIGKGGSGTVFKGVLKDGKFIAIKRLDSLSLQSEREFQNELQILGGLRSPFLVTLLGYCVEKNKRVLVYEYMPNTSLQESLFGDECFCLSWERRFCIIMDVARALEFLHLGCDPPVIHGDIKPSNVLLDAEFRGKISDFGLSRIKVEGEFGVDLFSQDLGKSQDLWKSQDLSGNLTAETPVIGTPVESVSEVDFALALQASTSSKNSRSCLNVKALNLNSLNYNANIVGESESRNVNAKGKEISSLDTGGGGDDCWNSNKFVPYDDEFCSTDYSKELAINNACLVDEEKENGKQWGEDWWWRQDGSGELCSKDYVKEWIGSQICPSNADWDDGIGSAKINNIQEKSELENSSPIDKASDVNGPQLLQVSVIENADNGVVDIKELKGKKSHKKKKNRKMQEWWKEEHLAELSKKKSNKLKSLQTKWKKGLKVPHFGLGRRFYLCQRSKNYGEEGQNECEQNGEFSFRRGWRKKSSRSIGSDMWSGDLFSRELSSTTSMRGTLCYVAPEYGGCGFLMEKADIYSFGVLILVIVSGRRPLHVLASPMKLEKANLISWCRHLAQAGGNNILELVDEKLKEDDYNKEQASLCINLALTCLQKIPELRPDIGDIVKILKGEMELPPLPFEFSPSPPSRLYSRSRRKQKGNAE 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g04404 729 SMART serkin_6 79 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g04404 729 Gene3D Transferase(Phosphotransferase) domain 1 155 268 - -
Mepo6g04404 729 Gene3D Transferase(Phosphotransferase) domain 1 512 701 - -
Mepo6g04404 729 PANTHER OS07G0586332 PROTEIN 14 724 IPR044576 -
Mepo6g04404 729 ProSiteProfiles Protein kinase domain profile. 79 704 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g04404 729 FunFam Receptor-like serine/threonine-protein kinase At4g25390 48 154 - -
Mepo6g04404 729 FunFam Receptor-like serine/threonine-protein kinase At4g25390 549 701 - -
Mepo6g04404 729 FunFam putative receptor-like protein kinase At1g80870 155 265 - -
Mepo6g04404 729 Gene3D Phosphorylase Kinase; domain 1 46 154 - -
Mepo6g04404 729 SUPERFAMILY Protein kinase-like (PK-like) 59 715 IPR011009 -
Mepo6g04404 729 MobiDBLite consensus disorder prediction 705 729 - -
Mepo6g04404 729 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672|GO:0006468
Mepo6g04404 729 Pfam Protein kinase domain 81 229 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g04404 729 ProSitePatterns Protein kinases ATP-binding region signature. 85 107 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g04404 Mepo-Chr6 56156740 56159127 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g04404 560 695 Receptor kinase-like Gene Family AT3G58690 31.915 2.71e-12 67.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Mepo6g04404 Pkinase 6.5e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g04404 - - tpra:123899844 1285.78