Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g04401 ATGGCTATAGATGGGCGATCGGTTAGTATTGTTTGGGGTTTTTCAGTGAATGTAGTGACTATTGCTATGATTGTTGTGCTTGGAATTAAACAAAAGATTGGTGTCCGAGGAGGTCAGAGATCGGAGATTCAGATGAGTCTTCCGGAGAAATTCGTCCTTTATTTTGTACCAGCCATTGGAGCATGTTGTTCAGTTTTGGAAATAATGTTTCTGCTGAAGAAAGAACATGATGGTCACTTTGTTGGATATCATAAGTGGTTACATAGCTGTTCTGAGTTGTTGGTGTGGGCAAATATCATTCTCTTCACAAAGTGTGCAAGCAGTCATTGCATAGTCTTCAACCGTATCTTATGTTTCTGGTGGATTCTGAAGCCAATACTGGGGATTTTCCATTTGATAACGAAATTTCCATCGTTGGAGGTTTCAGCATGCATCATGGAAAGTTTAGTTGTACTCTTGAATTTATCATTTGGCGTAGTTATCAATGTGATCAGGATAAAGAGATTATCTTCCAAAAGCAGTTTATTGGAAGATCCGCTTCTTTCTAATGAAGGGGACCTTGAGGAAGGTGGTAATCATGACCTTGGAAATAACGGTAAATTTTGGGATTTTATGACTTTCAAATTCATAAGTCCTGTAATGAATCAAGGTGTGCTAAAGCAATTAGACTCTGACGATCTTCTGCCACTACTACCTGATATGGGTCCTTCTTTCTGTCATGATATAATTTTGAATAGCTGGCGAGCTCAAGTGGGTAATAATAGTTCAAATCCATCCTTGTTTAGAGCACTTTGTAATGCATATGGATGGCCATATCTCTGCCTTGGTTTATTGAAGGTGATAAATGATGGTATTGGTTTTGCGGGACCATTGCTTCTCAACAAGCTGATCAAGTTTCTTCAACAAGGTTCAGTAAGTTGGGATGGGTATTTACTTGCACTATCCTTGGGTCTCACATCAATAATTAAATCTTTTTTAGATACACAATATACTTTTCGTCTTTCCAAACTGAAGCTAAAGCTGCGATCTAGTATCATGACTCTAATCTATCAGAAGTGTCTATATGTGAACCTAGCAGAGCGTTCAAAATTCACAAATGGAGAAATTCAAACATTTATGTCGGTGGATGCTGACCGAACTGTCAACCTGTGTAATAGTTTCCATGATATGTGGAGCCTGCCTTTACAAATTGGAGTGGCACTTTATCTTCTGTATACTCAAGTCAAATTTGCATTTGTGTCTGGATTAGCAATAACCATTTTATTAATACCAGTGAATAAATGGATATCAACACTGATTGCAAGGGCCACTGAGCAAATGATGAAGGAGAAGGATGAAAGGATTCGTAGAACCGGAGAACTTTTGACTTATATTCGCACTTTGAAGATGTATGGATGGGAACTTCTTTTTTCTAGTTGGTTGATGGCGACAAGATCCTTGGAAGTGAAACACTTGGCTACTCGGAAATACTTGGATGCATGGTGTGTATTCTTTTGGGCTACAACACCATCACTCTTTTCTCTTTCCACATTTGGACTCTTTGCTTTGATGGGACATCAACTTGATGCTGCAACGGTTTTCACTTGTATTGCTTTGTTTAACACGCTGATTTCACCACTTAATTCATTCCCTTGGGTGATTAATGGATTGATTGATGCCGTCATATCCACCAGACGGTTGAGTAGGTTTCTTTCTTGCCCTGAACATAGACGGGAAGTGGGAGAGAACAGTTCCTGTTCATCATCATTCCTGAGTATACAGCCGGATTCTTTACAAGATTTAGCTATCTTCATCCAAGACGCATGCTGTTCTTGGTCAAGTGGTGATGAAGAAGCAAAAAATCTGGCGTTGAATCATGTGACTCTTAGCCTGTCCAAGAGTTCCTTTGTTGCAGTTATTGGAGAGGTTGGTTCCGGTAAATCGTCCCTGCTATATTCAATTCTCGGAGAAATGCGGCTTGACCATGGATCTATTTATTCTCATGGATCGGTAGCTTATGTACCACAGGTCCCTTGGATTATATCTGGAACAGTTCGTGACAACATACTATTTGGGAAAAGCTATAATCCCGAAAGGTATGCAGATACAATAAATGCATGTGCATTGGATGTTGATATCTCATCGATGGTTGGTGGTGACATGGCTTATATTGGAGAGAAAGGAGTCAACTTATCAGGTGGACAGAGAGCTCGTCTTGCGTTGGCAAGGGTACTGTATCATGACTCAGATGTTATTATGCTCGATGACATCCTGAGTGCAGTTGATGTACAAGTTGCTCAGTGGATCTTACACAATGCCATTCTTGGTCCTCTTTTGAAGGGAAAAACCCGATTGCTCTGTACCCACAACATTCAGGCAATATCTTCTGCAGATATGATTGTTGTATTGGACAAAGGACACATAAAGTGGATGGGAAGTTCAGCTGACTTTCCAACTTCTTTATATACAGCATTCTCCCCATTGAATGAAATGGATTCAACTCCACATAATCCTCAGCAATCTTGCAGCACAAATTCTTCTATATCCGAGGAGCAGTCTCTTCCTGATAGAATTGTCATGCATGCTTTGGAGGGAGAAGAGGATGTAATTGAAGTTGAGTTGAGGAAAGAGGGGAAAGTTGAACTTGGAGTGTATAAGAACTATGCTGCTTTTACTGGATGGTTCATTGCCATTATTATATGTCTATCAGCTATTCTGATGCAAGCTTCACGTAATGGAAATGATTTATGGCTTTCATATTGGGTTGATTCCACAACGGAAGACGGTCAAACAAGTTACTCTATGTCTTTCTATCTGGCTATACTATGTCTCTTTTGTATTATGAATTCCCTTTTCACATTGGTGAGGGCGTTCTCTTTTGCATTTGGTGGTTTACAAGCGGCAACCAAGGTACACAATAGATTGCTCAGCAAGCTTATCAATGCACCTGTGCAATTCTTTGATCAGACCCCTGGCGGAAGAATACTCAATAGGTTATCTTCAGATCTTTATACAATCGATGATTCTCTTCCATTTATTTTGAACATTCTCCTGGCTAATTTTGTAGGCCTTCTGGGTATTGCAATTATTTTGTCTTACGTACAGGTCTTCTTCTTAGTTCTGCTATTGCCATTTTGGTATATATACAGTAGACTTCAGTTCTTCTACAGGTCAACATCGAGAGAATTACGACGACTGGATAGTGTTTCTCGCTCTCCAATATATACATCTTTCACCGAAACACTTGATGGATCATCAACTATTAGGGCATTTAAATCTGAGGACTTTTTCTTTTCCAAATTTACTGACCACATAACACTGTATCAGAAGACTTCCTATACAGAGATAGTGGCGAGTCTGTGGCTTTCCTTGCGTCTTCAGTTATTAGCTGCATTTATCATCTCATTCATAGCCCTGATGGCTGTTGCCGGATCTCATGGCAGTTTGCCTATCAATTTTGGCACCCCAGGACTGGTTGGATTGGCCCTCTCGTACGCGGCACCAATTGTGTCCCTGCTGGGGAGTTTCCTAACAAGTTTCACTGAAACAGAAAAGGAAATGGTTTCAATCGAAAGAGCCCTTCAATACATGGATATTCCTCAAGAAGAACAAGCTGGATGTCAATACTTGAATCCGGATTGGCCAAATCAAGGATTTATTGAATTCCAACGTGTGACTTTGAAATATATGCCATCTTTACCAGCTGCACTCTGCAATATTAGTTTTAAAATTGAAGGAGGGACACAGGTTGGAATAATTGGAAGAACAGGGGCTGGAAAGTCTAGTGTGTTAACTTCACTTTTCCGTCTTACCCCAATATGTGCAGGCTCTATCACAGTTGATGGTATGGACATTCAAATTATTCCTGTGAGAGAACTACGAGCGCATTTGGCTATTGTTCCTCAGAGTCCATTCTTGTTTGAAGGATCACTGCGGGATAACCTAGATCCATTCAAAACGAATGATGACTCGAAAATTTGGGATGCACTGGAGAAGTGCCATGTGAAAGAGGAAGTAGAAGTAGCCGGGGGGTTGGATGTTCTTGTAAAGGAAGGGGGGATGTCATTTTCAGTTGGCCAGCGGCAGCTTCTTTGCCTTGTGCGAGCACTTCTTAAATCTTCAAAAGTTCTTTGTTTGGATGAATGCACAGCCAGTGTGGACATTCAAACTGCTTCCCTGCTGCAAAGCACCATATCCAGTGAATGCAAAGGAATGACGGTCATCACAATTGCTCACCGGATTTCAACTGTAATAAATCTGGATAATATTCTGATTCTTGATCATGGGAACCTGGCTGAACAAGGACATCCGCAGATCCTTCTGAAAGATGGCACCTCTATATTTTCTAGTTTTGTGAAAGCTTCATCCATGTGA 4353 0.4055 MAIDGRSVSIVWGFSVNVVTIAMIVVLGIKQKIGVRGGQRSEIQMSLPEKFVLYFVPAIGACCSVLEIMFLLKKEHDGHFVGYHKWLHSCSELLVWANIILFTKCASSHCIVFNRILCFWWILKPILGIFHLITKFPSLEVSACIMESLVVLLNLSFGVVINVIRIKRLSSKSSLLEDPLLSNEGDLEEGGNHDLGNNGKFWDFMTFKFISPVMNQGVLKQLDSDDLLPLLPDMGPSFCHDIILNSWRAQVGNNSSNPSLFRALCNAYGWPYLCLGLLKVINDGIGFAGPLLLNKLIKFLQQGSVSWDGYLLALSLGLTSIIKSFLDTQYTFRLSKLKLKLRSSIMTLIYQKCLYVNLAERSKFTNGEIQTFMSVDADRTVNLCNSFHDMWSLPLQIGVALYLLYTQVKFAFVSGLAITILLIPVNKWISTLIARATEQMMKEKDERIRRTGELLTYIRTLKMYGWELLFSSWLMATRSLEVKHLATRKYLDAWCVFFWATTPSLFSLSTFGLFALMGHQLDAATVFTCIALFNTLISPLNSFPWVINGLIDAVISTRRLSRFLSCPEHRREVGENSSCSSSFLSIQPDSLQDLAIFIQDACCSWSSGDEEAKNLALNHVTLSLSKSSFVAVIGEVGSGKSSLLYSILGEMRLDHGSIYSHGSVAYVPQVPWIISGTVRDNILFGKSYNPERYADTINACALDVDISSMVGGDMAYIGEKGVNLSGGQRARLALARVLYHDSDVIMLDDILSAVDVQVAQWILHNAILGPLLKGKTRLLCTHNIQAISSADMIVVLDKGHIKWMGSSADFPTSLYTAFSPLNEMDSTPHNPQQSCSTNSSISEEQSLPDRIVMHALEGEEDVIEVELRKEGKVELGVYKNYAAFTGWFIAIIICLSAILMQASRNGNDLWLSYWVDSTTEDGQTSYSMSFYLAILCLFCIMNSLFTLVRAFSFAFGGLQAATKVHNRLLSKLINAPVQFFDQTPGGRILNRLSSDLYTIDDSLPFILNILLANFVGLLGIAIILSYVQVFFLVLLLPFWYIYSRLQFFYRSTSRELRRLDSVSRSPIYTSFTETLDGSSTIRAFKSEDFFFSKFTDHITLYQKTSYTEIVASLWLSLRLQLLAAFIISFIALMAVAGSHGSLPINFGTPGLVGLALSYAAPIVSLLGSFLTSFTETEKEMVSIERALQYMDIPQEEQAGCQYLNPDWPNQGFIEFQRVTLKYMPSLPAALCNISFKIEGGTQVGIIGRTGAGKSSVLTSLFRLTPICAGSITVDGMDIQIIPVRELRAHLAIVPQSPFLFEGSLRDNLDPFKTNDDSKIWDALEKCHVKEEVEVAGGLDVLVKEGGMSFSVGQRQLLCLVRALLKSSKVLCLDECTASVDIQTASLLQSTISSECKGMTVITIAHRISTVINLDNILILDHGNLAEQGHPQILLKDGTSIFSSFVKASSM 1450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g04401 1450 CDD ABC_6TM_MRP7_D1_like 275 560 - -
Mepo6g04401 1450 SUPERFAMILY ABC transporter transmembrane region 887 1195 IPR036640 GO:0005524|GO:0016020
Mepo6g04401 1450 CDD ABC_6TM_MRP7_D2_like 890 1190 - -
Mepo6g04401 1450 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 277 552 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo6g04401 1450 Pfam ABC transporter transmembrane region 891 1140 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo6g04401 1450 Pfam ABC transporter transmembrane region 274 540 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo6g04401 1450 Pfam ABC transporter 1231 1377 IPR003439 GO:0005524
Mepo6g04401 1450 FunFam ABC transporter C family member 13 578 833 - -
Mepo6g04401 1450 Gene3D - 1198 1447 IPR027417 -
Mepo6g04401 1450 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 596 823 IPR003439 GO:0005524
Mepo6g04401 1450 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 200 1448 - -
Mepo6g04401 1450 FunFam Multidrug resistance-associated protein ABC domain protein 251 569 - -
Mepo6g04401 1450 ProSitePatterns ABC transporters family signature. 724 738 IPR017871 GO:0005524|GO:0016887
Mepo6g04401 1450 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 596 810 IPR027417 -
Mepo6g04401 1450 Gene3D - 587 839 IPR027417 -
Mepo6g04401 1450 FunFam ABC transporter C family member 5 855 1196 - -
Mepo6g04401 1450 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1206 1437 IPR027417 -
Mepo6g04401 1450 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 891 1178 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo6g04401 1450 Gene3D ABC transporter type 1, transmembrane domain 261 568 IPR036640 GO:0005524|GO:0016020
Mepo6g04401 1450 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1213 1446 IPR003439 GO:0005524
Mepo6g04401 1450 FunFam ATP-binding cassette (ABC) transporter, putative 1198 1447 - -
Mepo6g04401 1450 Pfam ABC transporter 617 749 IPR003439 GO:0005524
Mepo6g04401 1450 CDD ABCC_MRP_domain1 598 799 - -
Mepo6g04401 1450 Gene3D ABC transporter type 1, transmembrane domain 857 1197 IPR036640 GO:0005524|GO:0016020
Mepo6g04401 1450 CDD ABCC_MRP_domain2 1211 1430 - -
Mepo6g04401 1450 SUPERFAMILY ABC transporter transmembrane region 264 568 IPR036640 GO:0005524|GO:0016020
Mepo6g04401 1450 ProSitePatterns ABC transporters family signature. 1349 1363 IPR017871 GO:0005524|GO:0016887
Mepo6g04401 1450 SMART AAA_5 1239 1423 IPR003593 GO:0016887
Mepo6g04401 1450 SMART AAA_5 626 800 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g04401 Mepo-Chr6 56117837 56133151 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g04401 617 840 Calmodulin-binding Proteins AT2G36910 26.446 7.56e-18 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g04401 K05674 - gmx:100814181 2415.96