Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g04391 ATGGATTTTTCATCATCATGGATTAACACTTCCTTGGATCTCAACATTAATCCACGTAGTAGGGTTCATGAACAAGCTCCTGTAAGTTTCAAGAAATATGAGGTGGAAAACAATTTTTTCTCATTAGGGATGAGTATATCTTCTGCAAAAGAAGAGTCAAGTGGTGCTTTGGTAGAGGAGCTGAAACGAGTGAGTGCAGAAAACAAGAAGTTGACAGGAATGTTGACAGAGATGTGTGAGAATTACAACACATTGAGGAACAATTTGATGGAATATATGAGAAAGAATCCTGATCATAAGGAGCAAAGTCCATCACAGAAAAGAAAATCTGATGAAATAAGCAGCAGTAACAATCTAATGGGAGGAGTTACTGGAAACAACTCTGAAAGTAGTTCAAGTGATGGAGATCAATCATGCAAGAAACCAAGAGAAATTGTAGAAACTTGCATCAAGGCTAAAGTTTCAAGAGTTTATTTCAAGACAGAATCATCTGATTCAAGCCTTATTGTGAAAGATGGATATCAATGGAGAAAATATGGACAAAAGGTGACAAGGGATAATCCATCTCCAAGAGCATACTTCAAATGCTCATTTGCTCCAAGCTGCACAGTGAAGAAGAAGGTGCAAAGAAGTGTTGATGATCCATCAGTTGTGGTTGCAACATATGAAGGAGAGCATAATCATCCTCATCCTTCTCAAACGGAGCCGACAAATAATCGTTGTAGGAGCCAAATTAGTCCAGTAGCACCTTCTTCTGCACCAAGTACAGTTACTCTTGATTGGACAAAGAAAGCACCTTCTTCTGCACCTTCTAAGAATATGATGATAAATAATCCCAAAATGGAAGTACCACAGATTTTGGTGGAACAAATGGCTACTTCATTGACCAAGGATCTTAACTTCAGAGCAGCACTTGCTGCTGCTATATCAGGAAAAATGTTACACCAGAATTAG 954 0.3836 MDFSSSWINTSLDLNINPRSRVHEQAPVSFKKYEVENNFFSLGMSISSAKEESSGALVEELKRVSAENKKLTGMLTEMCENYNTLRNNLMEYMRKNPDHKEQSPSQKRKSDEISSSNNLMGGVTGNNSESSSSDGDQSCKKPREIVETCIKAKVSRVYFKTESSDSSLIVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCTVKKKVQRSVDDPSVVVATYEGEHNHPHPSQTEPTNNRCRSQISPVAPSSAPSTVTLDWTKKAPSSAPSKNMMINNPKMEVPQILVEQMATSLTKDLNFRAALAAAISGKMLHQN 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g04391 317 MobiDBLite consensus disorder prediction 109 135 - -
Mepo6g04391 317 MobiDBLite consensus disorder prediction 231 275 - -
Mepo6g04391 317 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 48 313 IPR044810 GO:0003700
Mepo6g04391 317 MobiDBLite consensus disorder prediction 224 276 - -
Mepo6g04391 317 SUPERFAMILY WRKY DNA-binding domain 168 231 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo6g04391 317 FunFam WRKY transcription factor 40 155 232 - -
Mepo6g04391 317 Coils Coil 75 95 - -
Mepo6g04391 317 ProSiteProfiles WRKY domain profile. 165 231 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo6g04391 317 Gene3D WRKY domain 153 232 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo6g04391 317 MobiDBLite consensus disorder prediction 96 140 - -
Mepo6g04391 317 SMART WRKY_cls 170 230 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo6g04391 317 Pfam WRKY DNA -binding domain 171 229 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g04391 Mepo-Chr6 56002492 56003982 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g04391 1 317 WRKY Transcription Factor Family AT1G80840 53.892 3.23e-99 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mepo6g04391 WRKY 2.5e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g04391 - - gmx:100798375 392.119