Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g04376 ATGGACCTTCTAAGATTAGAGCCATGTTTATCTAATAATTTGAACATCTCATTTTCTGAGAAGAGACAGACAGAAAATGAAGAGAAAGAACATCTTCTACTGGATTTAACTCTTCCTAGTAAAGATTCTTGTGATGATGAGTCAAAACAAGAACTCAATCTCATAAACTGTTTCGATACAGAACCGTCCATGTCGATGAATTCATCATCGGAATCAAATCATGGTAATGAATTAGAGCCAAGGATTTTCTCATGCAACTATTGTCAAAGAAAGTTTTATAGTTCACAGGCACTTGGTGGACACCAAAATGCACACAAAAGAGAAAGAACTATGGCAAAAAGAGGACACAAATCTGCGGCTTCGCTAGATTTTGAACACAGGTACTCAAGTATGGCTTCTCTTCCTTTGCATGGCTCTTATAAAAGATCACCATCATCACTTGGAATTCAGGTGCACTCTTCTATGATTCAAAAACCTTCTTATCAAACACCGTTTTTCGGTTTGTCACGTTATTGTGGTCCAAACCAGTGGCAGAAGCTGCCTATATATTCACAACCAGCATCAAGGAATCTTCCTGTTGAGGGAGAAACTGATGGATCATCATCCTTGACTAGTGGCATACCTACAAGATCAGGGAAATTTTCTCCAAGAAAGGTGCAAAATGGATTTGGAGGTTATAATGCTACAAGTTTGAAGAATAAACAAGAGGAGTTGCAGAAGCTTGACTTGTCCCTCAAACTCTAA 744 0.3831 MDLLRLEPCLSNNLNISFSEKRQTENEEKEHLLLDLTLPSKDSCDDESKQELNLINCFDTEPSMSMNSSSESNHGNELEPRIFSCNYCQRKFYSSQALGGHQNAHKRERTMAKRGHKSAASLDFEHRYSSMASLPLHGSYKRSPSSLGIQVHSSMIQKPSYQTPFFGLSRYCGPNQWQKLPIYSQPASRNLPVEGETDGSSSLTSGIPTRSGKFSPRKVQNGFGGYNATSLKNKQEELQKLDLSLKL 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g04376 247 ProSiteProfiles Zinc finger C2H2 type domain profile. 83 110 IPR013087 -
Mepo6g04376 247 FunFam Zinc finger protein 2 60 129 - -
Mepo6g04376 247 Gene3D Classic Zinc Finger 61 137 - -
Mepo6g04376 247 MobiDBLite consensus disorder prediction 188 219 - -
Mepo6g04376 247 SUPERFAMILY beta-beta-alpha zinc fingers 80 111 IPR036236 -
Mepo6g04376 247 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 20 247 IPR044246 GO:0009788
Mepo6g04376 247 ProSitePatterns Zinc finger C2H2 type domain signature. 85 105 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g04376 Mepo-Chr6 55829736 55830993 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g04376 20 247 C2H2 Transcription Factor Family AT5G10970 40.496 2.57e-38 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mepo6g04376 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g04376 - - gmx:100812573 254.218