Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g04375 ATGTTGTTCTTCCCTTTCCTTAAACACTGTCCATGCATGCTTATGTTCCTCTTGTTTACTTTGTTTTTCACTTCAACAGAAGTTTATGATCCACTTGATCCAAATGGGAATATCACAATAACATGGGACGTTGTTAGCTTGACATCTGACGGTTATGTTGCGGTTGTTACAATAAACAACTTTCAACAATATCGTCATATAACAGCACCCGGATGGTCTGTAGGATGGAGTTGGGCAGAGAAAGAGATCATATGGGCCGTCGTGGGAGGGGAAGCAACTGAACAAGGAGATTGCTCAGAGTTTACGGAAACCTTCCCATATTGCTGTAAGAAGGATCCAACAATTATAGACTTGCACCCTGGAACGCCCTATAATAAACAATTTGCAAATTGCTGCAAAGGTGGTGTACTAAGAACACGGGCACAAGATCCGCCAAATGCAGTTGCCGCGTTTCAAGTCAGTGTTGGTAGAGCTGGCAATAACAAAACTGCCATCATAGCGCCGCAGGATTTCGCTTTGAAAACACCAGGTTATACATGCAACCAACCAAAAATTGCGGAACTTACTGAATTCACATCACCGAACGAAAGGAGAGTGACTCAAGCAATTTTGACATGGAAGGTGACATGCACATATTCACAATTTCTAGTTCAGAAACCTCCAAATTGCTGTGTCACCCTCTCGTCTTTCTATAGCGAGAATATTGTATCCTGCCCGAACTGTTCATGCGGCTGCCTAGACAACTCATTTCAATCAGGAAGTTGTATAGATTCAAGTTCATCGAATTTGGCCTCGATTGTTAACAGCCCTGGAGAGAAAGGTGTTGAGCCTTTAGTTGAATGTACTAGGCATATGTGTCCGATTAAAGTTCATTGGCACATTAAGTATAACTACTATGAGTATTGGCGCGTGAAGATTACCGTTTTTAATTTAAATTACAGAAAGAATTACTCTGACTGGAACTTGGTTGTTCAACATCCAAGTTTTGATAAATTGACACAAATTTTCAGTTACAACTACAAATCATTAGCTCCATATGGATCAACAAATGATACTGCAATGCTTTGGGGAGTTAAATTCTTCAATGATGTACTCATGCAAGCTGGTCCTAATGGAAATGTACAGTCGGAGCTACTTTTTCGAAAGAATAAATCAAGTTTTAGTTTCCGTGGGGGCTGGGGTTTTCCAGAGAAGATTTATTTCAACGGTGACGAATGTAGTATGCCACCACCCGACGCTTACCCACGGTTACCTAATGACTGTTCCACACAAGAGGTTTCTCTCCTTGCTTTGATGATGACCTCTTTCATAGTGTTGGTACTTTGCACATATGCTTAG 1338 0.4111 MLFFPFLKHCPCMLMFLLFTLFFTSTEVYDPLDPNGNITITWDVVSLTSDGYVAVVTINNFQQYRHITAPGWSVGWSWAEKEIIWAVVGGEATEQGDCSEFTETFPYCCKKDPTIIDLHPGTPYNKQFANCCKGGVLRTRAQDPPNAVAAFQVSVGRAGNNKTAIIAPQDFALKTPGYTCNQPKIAELTEFTSPNERRVTQAILTWKVTCTYSQFLVQKPPNCCVTLSSFYSENIVSCPNCSCGCLDNSFQSGSCIDSSSSNLASIVNSPGEKGVEPLVECTRHMCPIKVHWHIKYNYYEYWRVKITVFNLNYRKNYSDWNLVVQHPSFDKLTQIFSYNYKSLAPYGSTNDTAMLWGVKFFNDVLMQAGPNGNVQSELLFRKNKSSFSFRGGWGFPEKIYFNGDECSMPPPDAYPRLPNDCSTQEVSLLALMMTSFIVLVLCTYA 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g04375 445 PIRSF COBRA 1 445 IPR006918 GO:0010215|GO:0016020
Mepo6g04375 445 PANTHER PROTEIN COBRA 15 435 IPR006918 GO:0010215|GO:0016020
Mepo6g04375 445 Pfam COBRA-like protein 52 213 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g04375 Mepo-Chr6 55814964 55818516 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g04375 14 440 COBRA Gene Family AT3G02210 59.629 0.0 570
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g04375 - - mtr:25487967 863.218