Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g04371 ATGGCTGATAAGAAGAGTTCAATTGCTATTTTCGACTTTCAGTTGTTAGAGTCTGCAACAAACAGCTTTTCCGCAGATAATATCATGGGAGAGACCGGTTCTATAATTGTTTACAGAGCTCGTTTCGATGAACATTTCCAGGCTGCTGTCAAGAAAGCAGACAGTAATGCTGATAGAGAATTTGAGAATGAAGTGAGTTTGTTGAGCAAGATTCGGCATCAGAATATCATAAAAATCCTAGGCTATTGTATTCACGGTGAATCGAGGTTTCTTGTTTATGAGTACATGGAGAGTGGTTCTCTGGAATCTCAATTGCATGGGCCTACTAATGGATCATCTTTAACTTGGTATATCCGGTTAAGAATTGCGATTGATGTTGCTAGAGCATTAGAATATCTCCACGAGCACTCCAATCCTCCTGTGGTTCATAGAGACTTGAAATCTTCCAATGTTCTTCTGGATTCCGATTTTAATGCCAAGCTATCAGATTTTGGACTTGCTGTAGCATCTGGCGTGCAACACAAGAACATGAAGATGTCGGGAACTTTAGGATATGTGGCACCCGAGTACATATCACATGGTAAACTAACTGATAAGAGTGATGTCTATGCTTTCGGTGTTGTCCTTCTAGAATTACTTACCGGAAAAAAACCAATGCAGAACATGTCCTCAGACCAATATCAATCTCTGGTTTCATGGGCCATGCCTCAGCTAACTGACAGATCAAAGCTTCCAAGTATTCTAGATCCTGTTATCCAAAATACAATGGATTTGAAGCATTTATATCAGGTTGCTGCAGTAGCTGTGCTATGTGTGCAAGCTGAACCAAGTTATAGGCCACTTATAACAGATGTTCTGCACTCTCTCATCCCTTTGGTACCCTTAGAGCTTGGAGGGTCACTCAGAGTTACTGAACCAATCGGCTCGGAAAATCTTCAATGA 942 0.4098 MADKKSSIAIFDFQLLESATNSFSADNIMGETGSIIVYRARFDEHFQAAVKKADSNADREFENEVSLLSKIRHQNIIKILGYCIHGESRFLVYEYMESGSLESQLHGPTNGSSLTWYIRLRIAIDVARALEYLHEHSNPPVVHRDLKSSNVLLDSDFNAKLSDFGLAVASGVQHKNMKMSGTLGYVAPEYISHGKLTDKSDVYAFGVVLLELLTGKKPMQNMSSDQYQSLVSWAMPQLTDRSKLPSILDPVIQNTMDLKHLYQVAAVAVLCVQAEPSYRPLITDVLHSLIPLVPLELGGSLRVTEPIGSENLQ 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g04371 313 FunFam probable receptor-like protein kinase At1g80640 96 294 - -
Mepo6g04371 313 Pfam Protein tyrosine and serine/threonine kinase 38 256 IPR001245 GO:0004672|GO:0006468
Mepo6g04371 313 ProSiteProfiles Protein kinase domain profile. 23 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g04371 313 Gene3D Phosphorylase Kinase; domain 1 1 95 - -
Mepo6g04371 313 CDD STKc_IRAK 29 292 - -
Mepo6g04371 313 SUPERFAMILY Protein kinase-like (PK-like) 7 289 IPR011009 -
Mepo6g04371 313 SMART serkin_6 23 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g04371 313 PANTHER OS01G0750732 PROTEIN 5 291 - -
Mepo6g04371 313 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Mepo6g04371 313 Gene3D Transferase(Phosphotransferase) domain 1 96 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g04371 Mepo-Chr6 55797606 55801396 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g04371 5 293 Receptor kinase-like Gene Family AT3G58690 47.157 1.86e-93 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Mepo6g04371 PK_Tyr_Ser-Thr 5.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g04371 - - gmx:100811188 547.74