Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g04363 ATGGACACCAAGAATTCCCTATCCAATACTTGTAAATGCTTCAGCATCCAAGAACAGAACTTAGAAGATGAAGCTCTACCCACAATCACCTGCTCATTAAGGTTACCCCCTCCTCATGTCCTTCTCGCAAAAAAGATTGGAGCTGAGTTTATAGGGACATTGATTCTGATGTTTGCTGGGACAGCCACTGCTATTGTTAACCAAAAGACACAAGGCTTGGAGACTCTGATTGGGTGTGCTACCTCTACTGGTCTTGCAGTTATGATGATCATCCTCTCCATTGGCCACATCTCCGGTGCTCATCTCAACCCTGCAGTCACAATTTCCTTTGCTGCATTGAAGCACTTCCCGTGGAAGCATGTGCCTATGTATATTGGTGCACAAGTTTTGGCATCAATATGTGCTGCATTTGCTCTCAAAGGGGTTTTTCACCCTTTTATGAGTGGTGGAGTCACTGTTCCTTCTGGAGGATATGGTCAAGCTTTTGCTTTAGAATTCATTATCAGCTTTAATCTAATGTTCGTTGTCACGGCAGTGGCCACCGACACAAGAGCTGTAGGAGAACTAGCAGGAATTGCGGTGGGAGCAACTGTGATGCTCAATATACTCATAGCAGGGCCAATAACAGGAGCGTCAATGAACCCAGTAAGAACTCTAGGTCCAGCTATAGCTGCAAATAACTACAAAGCCATATGGGTATATCTCTTAGCTCCAATACTTGGAGCTCTAGGTGGGGCAGGAACTTATACTGCAGTCAAGCTTCCCGAAGAAGATGATAATGCAAAGACTAATGCTTCTCCAAACCACCCCAGGTTTAGAAGATGA 825 0.4485 MDTKNSLSNTCKCFSIQEQNLEDEALPTITCSLRLPPPHVLLAKKIGAEFIGTLILMFAGTATAIVNQKTQGLETLIGCATSTGLAVMMIILSIGHISGAHLNPAVTISFAALKHFPWKHVPMYIGAQVLASICAAFALKGVFHPFMSGGVTVPSGGYGQAFALEFIISFNLMFVVTAVATDTRAVGELAGIAVGATVMLNILIAGPITGASMNPVRTLGPAIAANNYKAIWVYLLAPILGALGGAGTYTAVKLPEEDDNAKTNASPNHPRFRR 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g04363 274 CDD MIP 44 249 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo6g04363 274 SUPERFAMILY Aquaporin-like 41 261 IPR023271 -
Mepo6g04363 274 FunFam Aquaporin NIP2-1 33 264 - -
Mepo6g04363 274 PRINTS Major intrinsic protein family signature 195 217 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo6g04363 274 PRINTS Major intrinsic protein family signature 164 182 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo6g04363 274 PRINTS Major intrinsic protein family signature 44 63 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo6g04363 274 PRINTS Major intrinsic protein family signature 83 107 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo6g04363 274 PRINTS Major intrinsic protein family signature 120 139 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo6g04363 274 PRINTS Major intrinsic protein family signature 232 252 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo6g04363 274 PANTHER AQUAPORIN NIP2-1 9 258 IPR034294 -
Mepo6g04363 274 ProSitePatterns MIP family signature. 101 109 IPR022357 -
Mepo6g04363 274 Gene3D Glycerol uptake facilitator protein. 36 265 IPR023271 -
Mepo6g04363 274 Pfam Major intrinsic protein 42 248 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g04363 Mepo-Chr6 55691026 55692513 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g04363 3 274 Major Intrinsic Protein MIP AT1G80760 78.388 5.29e-147 412