Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g04342 ATGGAGCGAATATTTGAAGCTGAGACGGAGTCTCCAAACAAGGAAAAGATAAAGGAGATTGTTGTTGATTTAGCCAAGCACGAACAAATTTCTGAGACCAATGTATATAATTGGTTTCAGAACAGACGTGCTAGGTACAAGAGAAAGCATCAGAGTAGTGTTAATGTTGAATCAAAAGTGGAGGCCGAGGTTGATTCTGATGATAAGAAAATTGATGAGTTTTGTGCGTCTCAACTTGCTTTTGATGGGTCTACTAGGCTTGGTATGTATTGTGATCCATTGATCAACCAATTAAGCTCAAGGCAGCGTTGGGCACCAATACCTGTGCAACTTCAAACTATGGAGCGGATATTTGAAGCTGAGACGGGGTGTCCAAGCAAGGAAAAGATAAAGGAGATAGTTGGTGATTTAAACTGA 417 0.4053 MERIFEAETESPNKEKIKEIVVDLAKHEQISETNVYNWFQNRRARYKRKHQSSVNVESKVEAEVDSDDKKIDEFCASQLAFDGSTRLGMYCDPLINQLSSRQRWAPIPVQLQTMERIFEAETGCPSKEKIKEIVGDLN 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g04342 138 Pfam Homeodomain 1 48 IPR001356 GO:0003677
Mepo6g04342 138 CDD homeodomain 1 50 IPR001356 GO:0003677
Mepo6g04342 138 PANTHER WUSCHEL-RELATED HOMEOBOX 13 76 137 IPR044559 GO:0003700
Mepo6g04342 138 Gene3D - 1 55 - -
Mepo6g04342 138 ProSiteProfiles 'Homeobox' domain profile. 1 49 IPR001356 GO:0003677
Mepo6g04342 138 SUPERFAMILY Homeodomain-like 1 51 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g04342 Mepo-Chr6 55413070 55416296 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g04342 1 62 Wox Gene Family AT4G35550 50.704 2.23e-16 71.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Mepo6g04342 Homeodomain 1.4e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g04342 - - cam:105851745 110.923