Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g04339 ATGGCAGTTATATCACTCTCTCTTCTTCCACCACCTTCATCAACTCATTCATGCTTCTGTGCCGGAGGAATTCATCTCCGTTCCCACAACAATTTCCTTTCCGTTCATTCTTCTCCTTTTCCTTCTTCCACTTTCTCCAACTCTAATTCTAAATTCTCTTCTGCTACTAGACCAAAACGCTTTCTCACTGTTTTTGCTGCTTCTTCTGATTATTATTCTACTCTCGGTGTTCCCAAATCCGCTACTGGTAAAGAAATCAAAGCCGCTTATCGAAGGTTAGCTCGTCAGTATCATCCTGATGTGAACAAGGAACCTGGGGCAACTGACAAGTTTAAAGAGATTAGTAATGCCTATGAGGTGCTATCAGATGACAAAAAGAGGGCTTTGTATGATCAATATGGCGAGGCAGGAGTTAAGAGTTCAGTCGGAGGAGGATCAAGTGCCTATGCGACAAATCCATTTGATTTATTTGAGACATTTTTTGGGCCAAATATGGGCGGCTTTTCTACCATGGATCCATCTGGATTTGGCACACGGCGTCGTAGTACTGTTACTAAGGGTGAAGACATCCGGTATGATTTCTCCTTGGAGTTTTCTGAGGCAATTTTTGGAACAGAGAAAGAATTTGAGCTTTTCCATTTAGAAACATGTGATGCCTGTACTGGTACTGGTGCAAAGTTAGGCTCCAAGATGAGAGTATGTTCCACTTGTGGTGGCAGGGGTCAGGTGATGAGGACCGAACAAACACCTTTTGGGTTGTTCTCACAGGTTTCAGTATGTCCAAATTGTGGAGGTGACGGGGAAGTCATATCTGAAAGTTGCCGTAAATGCAGTGGGGAAGGACGCATACGGGTTAAGAAAAATATTAAAGTTAAAGTTCCTCCTGGGGTTAGCGCAGGCAGTATTTTAAGAGTCACTGGAGAGGGTGATGCTGGACCAAGAGGGGGTCCTCCAGGAGATCTTTACGTATATCTTGATGTGCTTGAGATACCAGGAATTCAAAGAGATGATATTAATCTCCGCTCGACAATATCAATCAGTTATCTAGAAGCTATACTGGGGTCTGTAGTGAAGGTAAAGACGGTTGAAGGCACTTCTGAACTACAAATTCCTGCTGGTACCCAACCCGGAGATGTCCTCGTCCTTGCAAGGAAGGGTGTACCGAAATTAAACAGACCGTCAATACGTGGTGACCACTTATTTACTGTTAAAGTTACAATACCAAAACGTATTAGTTCAAAGGAGCGTGAGGTGCTTGAAGAACTTGCTTCTCTAGGCAACCCAAGCAGTCATTCAAAATCCCGTCCTAGGACTCAATCTTCCACTGGAAGTAAGGAAAGTCCTGCAGTTCAAATGGCCGAAAGTCCAACAGCAACAGTCACAGAAAAACCAGAGCAATCAGAAGACGAAGATGACTTGTGGAATAAACTAAAAAACGTGGCTGGATCTGTAGCAAATGGAGCTCTAAAGTGGTTTAAAGATAATCTCTAG 1491 0.4339 MAVISLSLLPPPSSTHSCFCAGGIHLRSHNNFLSVHSSPFPSSTFSNSNSKFSSATRPKRFLTVFAASSDYYSTLGVPKSATGKEIKAAYRRLARQYHPDVNKEPGATDKFKEISNAYEVLSDDKKRALYDQYGEAGVKSSVGGGSSAYATNPFDLFETFFGPNMGGFSTMDPSGFGTRRRSTVTKGEDIRYDFSLEFSEAIFGTEKEFELFHLETCDACTGTGAKLGSKMRVCSTCGGRGQVMRTEQTPFGLFSQVSVCPNCGGDGEVISESCRKCSGEGRIRVKKNIKVKVPPGVSAGSILRVTGEGDAGPRGGPPGDLYVYLDVLEIPGIQRDDINLRSTISISYLEAILGSVVKVKTVEGTSELQIPAGTQPGDVLVLARKGVPKLNRPSIRGDHLFTVKVTIPKRISSKEREVLEELASLGNPSSHSKSRPRTQSSTGSKESPAVQMAESPTATVTEKPEQSEDEDDLWNKLKNVAGSVANGALKWFKDNL 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g04339 496 FunFam Molecular chaperone Hsp40/DnaJ family protein 333 425 - -
Mepo6g04339 496 FunFam Chaperone protein dnaJ A6 chloroplastic 67 173 - -
Mepo6g04339 496 Gene3D DnaJ domain 67 172 IPR036869 -
Mepo6g04339 496 PRINTS DnaJ domain signature 126 145 IPR001623 -
Mepo6g04339 496 PRINTS DnaJ domain signature 106 126 IPR001623 -
Mepo6g04339 496 PRINTS DnaJ domain signature 90 105 IPR001623 -
Mepo6g04339 496 PRINTS DnaJ domain signature 72 90 IPR001623 -
Mepo6g04339 496 MobiDBLite consensus disorder prediction 425 462 - -
Mepo6g04339 496 Hamap Chaperone protein DnaJ [dnaJ]. 67 480 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Mepo6g04339 496 ProSitePatterns Nt-dnaJ domain signature. 111 130 IPR018253 -
Mepo6g04339 496 ProSiteProfiles Zinc finger CR-type profile. 204 286 IPR001305 GO:0031072|GO:0051082
Mepo6g04339 496 SUPERFAMILY Chaperone J-domain 66 174 IPR036869 -
Mepo6g04339 496 SUPERFAMILY HSP40/DnaJ peptide-binding domain 185 335 IPR008971 GO:0006457|GO:0051082
Mepo6g04339 496 MobiDBLite consensus disorder prediction 422 474 - -
Mepo6g04339 496 Gene3D - 217 281 - -
Mepo6g04339 496 CDD DnaJ 70 123 IPR001623 -
Mepo6g04339 496 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 204 284 IPR036410 -
Mepo6g04339 496 ProSiteProfiles dnaJ domain profile. 70 134 IPR001623 -
Mepo6g04339 496 CDD DnaJ_C 188 411 - -
Mepo6g04339 496 Pfam DnaJ C terminal domain 190 408 IPR002939 -
Mepo6g04339 496 Pfam DnaJ central domain 217 281 IPR001305 GO:0031072|GO:0051082
Mepo6g04339 496 NCBIfam molecular chaperone DnaJ 70 424 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Mepo6g04339 496 Gene3D - 187 323 - -
Mepo6g04339 496 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 32 437 - -
Mepo6g04339 496 FunFam Chaperone protein dnaJ A6 chloroplastic 217 281 - -
Mepo6g04339 496 Pfam DnaJ domain 70 131 IPR001623 -
Mepo6g04339 496 CDD DnaJ_zf 217 281 IPR001305 GO:0031072|GO:0051082
Mepo6g04339 496 FunFam Putative Mitochondrial DnaJ chaperone 274 323 - -
Mepo6g04339 496 Gene3D - 333 425 - -
Mepo6g04339 496 SMART dnaj_3 69 126 IPR001623 -
Mepo6g04339 496 SUPERFAMILY HSP40/DnaJ peptide-binding domain 334 419 IPR008971 GO:0006457|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g04339 Mepo-Chr6 55396333 55404885 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g04339 71 133 C2H2 Transcription Factor Family AT1G74250 47.826 1.58e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g04339 K03686 - gmx:100798567 791.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g04339 6 55396333 55404885 Mepo6g04339 6 55396333 55404885 ECH